HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:58.9 nTPM
HPA Brain:128.5 nTPM
GTEx:58.9 nTPM
FANTOM5:44.5 Scaled Tags Per Million
Pig:81.3 nTPM
Mouse:95.0 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040416Antibody HPA040434
Glial cells MediumLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.5
Sample id Sample description nTPM
Hippocampus
nTPM: 118.5
2621 Female, age 67, right hemisphere 164.7
1898 Male, age 80, left hemisphere 128.4
2148 Female, age 91, left hemisphere 124.5
1855 Male, age 76, left hemisphere 112.2
2529 Female, age 94, left hemisphere 92.4
1911 Female, age 85, right hemisphere 88.6
Dentate gyrus
nTPM: 128.5
2530 Female, age 94, left hemisphere 179.2
1927 Female, age 91, both hemispheres 140.7
2531 Female, age 67, both hemispheres 130.2
2010 Male, age 76, both hemispheres 116.5
2246 Female, age 85, both hemispheres 104.6
2528 Male, age 74, both hemispheres 99.8
Entorhinal gyrus
nTPM: 118.9
2613 Female, age 94, left hemisphere 163.4
2764 Male, age 80, right hemisphere 132.5
1787 Male, age 76, left hemisphere 121.2
2686 Male, age 75, right hemisphere 119.9
1938 Female, age 85, left hemisphere 104.2
2117 Female, age 91, right hemisphere 72.4
Hippocampus, CA1
nTPM: 127.6
2749 Male, age 80, left hemisphere 212.3
1873 Female, age 85, both hemispheres 132.6
2527 Male, age 74, both hemispheres 109.2
2082 Female, age 91, right hemisphere 92.2
2045 Male, age 76, both hemispheres 91.9
Hippocampus, CA2
nTPM: 119.4
1963 Male, age 80, left hemisphere 153.6
1892 Male, age 76, both hemispheres 150.0
2437 Female, age 94, left hemisphere 141.6
1940 Female, age 85, left hemisphere 92.3
2249 Male, age 74, both hemispheres 90.9
2113 Female, age 91, right hemisphere 88.0
Hippocampus, CA3
nTPM: 127.8
2620 Female, age 94, left hemisphere 174.5
2861 Female, age 67, both hemispheres 160.0
2137 Male, age 80, left hemisphere 141.7
1867 Male, age 76, both hemispheres 116.8
2436 Male, age 74, both hemispheres 90.1
1891 Female, age 85, both hemispheres 83.7
Parahippocampal cortex
nTPM: 118.1
2622 Female, age 67, right hemisphere 150.1
2245 Female, age 91, both hemispheres 136.8
2693 Female, age 94, both hemispheres 134.6
1850 Male, age 80, both hemispheres 118.4
1990 Female, age 91, right hemisphere 116.9
2532 Female, age 72, left hemisphere 112.5
2692 Male, age 74, both hemispheres 111.5
2250 Female, age 67, right hemisphere 110.8
1933 Female, age 85, both hemispheres 105.4
2018 Male, age 76, both hemispheres 84.5
Perirhinal gyrus
nTPM: 123.5
1847 Female, age 91, left hemisphere 137.8
1794 Male, age 80, right hemisphere 129.0
2521 Female, age 94, right hemisphere 127.7
1841 Female, age 85, right hemisphere 118.8
2848 Male, age 76, right hemisphere 104.4
Subiculum
nTPM: 100.2
2438 Female, age 94, left hemisphere 124.0
2619 Male, age 74, both hemispheres 111.7
1901 Male, age 80, both hemispheres 106.1
1977 Female, age 85, both hemispheres 98.9
2042 Male, age 76, both hemispheres 82.6
2729 Female, age 91, right hemisphere 78.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.9
Samples: 197

Max nTPM: 142.9
Min nTPM: 13.8
Std nTPM: 27.7
Median nTPM: 55.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 142.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 135.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 133.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 127.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 126.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 122.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 117.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 113.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 112.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 111.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 108.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.5
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 42.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.3
Pig sample Sample description nTPM
Subiculum
nTPM: 65.7
Samples: 4

Max nTPM: 92.0
Min nTPM: 50.8
Sample A Female 92.0
Sample B Female 50.9
Sample C Male 69.1
Sample D Male 50.8
Dorsal hippocampus
nTPM: 73.6
Samples: 4

Max nTPM: 97.4
Min nTPM: 49.8
Sample A Female 97.4
Sample B Female 82.7
Sample C Male 64.5
Sample D Male 49.8
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 86.1
Min nTPM: 64.3
Sample A Female 86.1
Sample B Female 70.8
Sample C Male 64.3
Sample D Male 68.8
Ventral hippocampus
nTPM: 81.3
Samples: 4

Max nTPM: 100.8
Min nTPM: 44.7
Sample A Female 86.3
Sample B Female 44.7
Sample C Male 93.5
Sample D Male 100.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.2
Samples: 4

Max nTPM: 104.8
Min nTPM: 83.0
Sample A Male 102.3
Sample B Male 104.8
Sample C Female 86.6
Sample D Female 83.0
Hippocampal formation
nTPM: 95.1
Samples: 4

Max nTPM: 101.3
Min nTPM: 86.8
Sample A Male 86.8
Sample B Male 96.0
Sample C Female 96.1
Sample D Female 101.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
618 Antisense, RP_040324_01_B06, Mouse strain C57BL/6J (56 days, male) 10.8
619 Antisense, RP_040324_01_B06, Mouse strain C57BL/6J (56 days, male) 7.2

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