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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
156.1
nTPM
FANTOM5:
83.0
Scaled Tags Per Million
Pig:
77.0
nTPM
Allen mouse:
11.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
156.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 91.1
1984
Male, age 76, both hemispheres
116.3
2301
Female, age 85, both hemispheres
97.7
2188
Female, age 91, both hemispheres
82.7
2090
Male, age 80, both hemispheres
67.9
Dorsal cochlear nucleus nTPM: 80.7
2370
Male, age 61, both hemispheres
90.5
2058
Male, age 76, both hemispheres
86.5
2187
Female, age 91, both hemispheres
79.5
2802
Male, age 74, right hemisphere
76.8
2378
Male, age 80, both hemispheres
70.2
Dorsal tegmental nucleus nTPM: 81.4
2083
Male, age 80, both hemispheres
93.8
2358
Male, age 61, both hemispheres
84.2
1936
Male, age 76, left hemisphere
83.2
2326
Male, age 74, both hemispheres
64.3
Dorsolateral tegmental area nTPM: 67.8
2654
Male, age 80, both hemispheres
89.3
2141
Male, age 76, both hemispheres
74.3
2751
Female, age 85, both hemispheres
64.0
2360
Male, age 74, both hemispheres
56.7
2337
Male, age 61, both hemispheres
54.4
Kolliker-Fuse nucleus nTPM: 96.0
2793
Female, age 91, left hemisphere
116.2
2163
Male, age 80, both hemispheres
112.9
2315
Male, age 76, right hemisphere
58.8
Lateral lemniscal nuclei nTPM: 140.0
2169
Male, age 76, both hemispheres
168.6
2453
Male, age 74, right hemisphere
161.8
2746
Female, age 85, left hemisphere
124.8
2320
Female, age 91, left hemisphere
124.1
2036
Male, age 80, both hemispheres
120.8
Lateral parabrachial nucleus nTPM: 95.0
2139
Female, age 85, right hemisphere
143.1
2790
Male, age 61, both hemispheres
100.8
2013
Male, age 80, both hemispheres
86.8
2792
Male, age 76, both hemispheres
49.3
Lateral vestibular nucleus nTPM: 102.3
2184
Male, age 76, both hemispheres
118.4
2311
Male, age 80, both hemispheres
86.3
Locus coeruleus nTPM: 88.3
2720
Male, age 74, both hemispheres
108.2
2123
Female, age 91, both hemispheres
107.6
2162
Male, age 80, both hemispheres
93.8
1980
Male, age 76, both hemispheres
84.6
2317
Female, age 72, unknown
84.4
2014
Male, age 55, unknown
76.0
2788
Male, age 74, unknown
63.3
Medial parabrachial nucleus nTPM: 95.1
2156
Male, age 61, both hemispheres
114.8
2854
Male, age 80, both hemispheres
106.5
2786
Male, age 76, both hemispheres
89.9
2463
Female, age 85, right hemisphere
82.8
2170
Female, age 91, both hemispheres
81.7
Medial periolivary nuclei nTPM: 130.3
2171
Female, age 85, both hemispheres
194.9
2063
Male, age 76, both hemispheres
162.4
2458
Female, age 91, both hemispheres
107.3
2791
Male, age 74, right hemisphere
103.7
2081
Male, age 80, both hemispheres
83.2
Motor facial nucleus nTPM: 137.8
2062
Male, age 76, both hemispheres
172.5
2327
Male, age 80, both hemispheres
163.7
2697
Female, age 85, both hemispheres
141.3
2795
Female, age 91, both hemispheres
130.8
2365
Male, age 74, right hemisphere
129.3
2126
Male, age 61, both hemispheres
88.9
Motor trigeminal nucleus nTPM: 110.8
2079
Male, age 80, both hemispheres
135.6
2560
Male, age 74, both hemispheres
129.3
2335
Male, age 61, both hemispheres
103.8
2321
Female, age 91, both hemispheres
95.1
2309
Male, age 76, both hemispheres
89.9
Nuclei of the trapezoid body nTPM: 150.2
2735
Female, age 85, both hemispheres
181.1
2159
Male, age 61, both hemispheres
170.5
1983
Male, age 76, both hemispheres
157.2
2166
Male, age 80, both hemispheres
123.3
2368
Female, age 91, both hemispheres
118.9
Nucleus raphe magnus nTPM: 156.1
2172
Female, age 85, both hemispheres
222.2
2160
Male, age 61, both hemispheres
175.0
2455
Male, age 74, both hemispheres
156.1
2328
Male, age 80, both hemispheres
140.3
2051
Male, age 76, both hemispheres
124.3
2459
Female, age 91, both hemispheres
118.7
Paramedian reticular nucleus nTPM: 95.8
2050
Female, age 85, both hemispheres
131.7
2313
Male, age 61, both hemispheres
99.5
2057
Male, age 80, both hemispheres
95.1
2052
Male, age 76, both hemispheres
56.7
Pedunculopontine tegmental nucleus nTPM: 77.7
1921
Female, age 85, both hemispheres
83.5
2334
Male, age 80, both hemispheres
82.3
2338
Male, age 61, both hemispheres
67.3
Pontine nuclei nTPM: 141.0
2787
Female, age 85, both hemispheres
226.5
1863
Male, age 55, unknown
171.0
1968
Male, age 76, left hemisphere
164.0
2109
Female, age 72, unknown
133.9
2727
Male, age 61, right hemisphere
133.0
2115
Male, age 80, left hemisphere
107.6
2454
Male, age 74, left hemisphere
101.9
2319
Female, age 91, both hemispheres
90.1
Pontine raphe nucleus nTPM: 109.2
2122
Female, age 85, midline
141.7
2853
Male, age 76, midline
76.7
Posteroventral cochlear nucleus nTPM: 77.2
2752
Female, age 85, both hemispheres
111.4
2070
Male, age 76, both hemispheres
87.4
2371
Male, age 61, both hemispheres
81.6
2341
Male, age 80, both hemispheres
59.7
2135
Female, age 91, both hemispheres
46.0
Principal sensory trigeminal nucleus nTPM: 125.2
2158
Male, age 61, both hemispheres
161.3
2008
Male, age 80, left hemisphere
128.5
2324
Male, age 76, both hemispheres
106.3
2367
Female, age 91, left hemisphere
104.9
Reticular pontine nucleus, caudal nTPM: 118.2
2332
Male, age 80, right hemisphere
169.5
2092
Male, age 76, both hemispheres
120.5
2457
Female, age 91, both hemispheres
106.8
2559
Male, age 74, both hemispheres
76.0
Reticular pontine nucleus, oral nTPM: 93.6
2012
Female, age 85, both hemispheres
115.5
2361
Male, age 74, both hemispheres
104.0
2366
Female, age 91, both hemispheres
103.6
2167
Male, age 76, both hemispheres
75.7
1939
Male, age 80, both hemispheres
69.5
Reticulotegmental nucleus nTPM: 107.0
2325
Male, age 76, both hemispheres
116.8
2452
Male, age 74, both hemispheres
107.6
2333
Male, age 80, both hemispheres
106.5
2322
Female, age 91, both hemispheres
96.9
Spinal trigeminal nucleus, oral nTPM: 109.0
2164
Male, age 80, both hemispheres
118.8
2737
Female, age 85, both hemispheres
114.6
1978
Male, age 76, both hemispheres
93.5
Subcoeruleus area nTPM: 97.2
2089
Male, age 76, left hemisphere
134.4
2323
Female, age 91, left hemisphere
110.2
1958
Male, age 80, both hemispheres
104.0
2451
Male, age 74, both hemispheres
84.3
2369
Female, age 85, left hemisphere
53.1
Superior olive nTPM: 125.9
1875
Female, age 85, both hemispheres
154.1
2329
Male, age 80, right hemisphere
132.5
2561
Female, age 91, both hemispheres
130.5
2020
Male, age 76, both hemispheres
110.3
2364
Male, age 74, right hemisphere
101.8
Ventral periolivary nuclei nTPM: 145.0
2130
Female, age 85, both hemispheres
189.2
2165
Male, age 80, both hemispheres
154.2
2794
Female, age 91, left hemisphere
141.9
2023
Male, age 76, both hemispheres
94.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 113.6
2449
Male, age 74, both hemispheres
150.4
1959
Male, age 76, both hemispheres
127.5
2840
Female, age 85, both hemispheres
121.3
2161
Male, age 80, both hemispheres
113.6
2456
Female, age 91, both hemispheres
96.7
2359
Male, age 61, both hemispheres
72.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
77.0
Pig sample
Sample description
nTPM
Pons nTPM: 77.0
Samples: 4
Max nTPM: 130.2
Min nTPM: 47.2
Sample A
Female
130.2
Sample B
Female
47.2
Sample C
Male
48.2
Sample D
Male
82.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
