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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.0
nTPM
Monaco:
166.7
nTPM
Schmiedel:
144.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.0
HPA sample
nTPM
gdT-cell nTPM: 62.0
Samples: 6
Max nTPM: 77.1
Min nTPM: 35.6
P10809_1007
57.1
P10809_1022
74.5
P10809_1041
77.1
P10809_1060
35.6
P10809_1077
64.8
P10809_1098
63.0
MAIT T-cell nTPM: 56.8
Samples: 6
Max nTPM: 71.0
Min nTPM: 40.6
P10809_1006
71.0
P10809_1024
40.6
P10809_1043
67.4
P10809_1062
47.5
P10809_1083
49.4
P10809_1097
64.9
Memory CD4 T-cell nTPM: 60.2
Samples: 6
Max nTPM: 85.8
Min nTPM: 31.2
P10809_1014
66.3
P10809_1026
63.8
P10809_1045
85.8
P10809_1064
67.1
P10809_1086
47.2
P10809_1113
31.2
Memory CD8 T-cell nTPM: 68.0
Samples: 5
Max nTPM: 95.7
Min nTPM: 40.9
P10809_1012
73.0
P10809_1027
40.9
P10809_1046
95.7
P10809_1065
71.9
P10809_1111
58.3
Naive CD4 T-cell nTPM: 58.8
Samples: 6
Max nTPM: 96.6
Min nTPM: 44.4
P10809_1015
44.4
P10809_1030
57.6
P10809_1049
96.6
P10809_1068
62.3
P10809_1085
44.5
P10809_1112
47.1
Naive CD8 T-cell nTPM: 56.5
Samples: 6
Max nTPM: 86.3
Min nTPM: 33.8
P10809_1016
42.8
P10809_1031
51.8
P10809_1050
58.5
P10809_1069
86.3
P10809_1087
33.8
P10809_1110
65.6
T-reg nTPM: 67.1
Samples: 6
Max nTPM: 102.5
Min nTPM: 37.0
P10809_1018
58.7
P10809_1037
81.4
P10809_1056
102.5
P10809_1075
62.8
P10809_1094
37.0
P10809_1106
60.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.5
Samples: 4
Max nTPM: 205.9
Min nTPM: 71.3
RHH5202_R3573
71.3
RHH5230_R3602
205.9
RHH5259_R3631
178.3
RHH5288_R3660
82.3
Effector memory CD8 T-cell nTPM: 162.2
Samples: 4
Max nTPM: 270.1
Min nTPM: 50.7
RHH5203_R3574
109.1
RHH5231_R3603
218.9
RHH5260_R3632
270.1
RHH5289_R3661
50.7
MAIT T-cell nTPM: 141.3
Samples: 4
Max nTPM: 177.4
Min nTPM: 105.5
RHH5233_R3605
113.4
RHH5205_R3576
168.7
RHH5262_R3634
177.4
RHH5297_R3663
105.5
Memory CD4 T-cell TFH nTPM: 120.5
Samples: 4
Max nTPM: 220.6
Min nTPM: 19.1
RHH5300_R3666
132.1
RHH5236_R3608
220.6
RHH5265_R3637
110.2
RHH5208_R3579
19.1
Memory CD4 T-cell Th1 nTPM: 149.4
Samples: 4
Max nTPM: 203.3
Min nTPM: 98.0
RHH5210_R3581
110.1
RHH5302_R3668
98.0
RHH5238_R3610
186.0
RHH5267_R3639
203.3
Memory CD4 T-cell Th1/Th17 nTPM: 161.0
Samples: 4
Max nTPM: 214.2
Min nTPM: 46.9
RHH5303_R3669
46.9
RHH5211_R3582
183.8
RHH5239_R3611
214.2
RHH5268_R3640
199.1
Memory CD4 T-cell Th17 nTPM: 149.8
Samples: 4
Max nTPM: 190.0
Min nTPM: 101.7
RHH5304_R3670
101.7
RHH5212_R3583
158.1
RHH5240_R3612
149.2
RHH5269_R3641
190.0
Memory CD4 T-cell Th2 nTPM: 125.4
Samples: 4
Max nTPM: 176.5
Min nTPM: 66.3
RHH5305_R3671
104.6
RHH5213_R3584
154.1
RHH5241_R3613
66.3
RHH5270_R3642
176.5
Naive CD4 T-cell nTPM: 131.7
Samples: 4
Max nTPM: 160.8
Min nTPM: 116.0
RHH5306_R3672
127.7
RHH5214_R3585
160.8
RHH5242_R3614
122.4
RHH5271_R3643
116.0
Naive CD8 T-cell nTPM: 124.4
Samples: 4
Max nTPM: 218.9
Min nTPM: 33.9
RHH5201_R3572
33.9
RHH5229_R3601
218.9
RHH5258_R3630
112.7
RHH5287_R3659
132.2
Non-Vd2 gdTCR nTPM: 150.6
Samples: 4
Max nTPM: 252.5
Min nTPM: 89.4
RHH5235_R3607
252.5
RHH5264_R3636
118.7
RHH5207_R3578
89.4
RHH5299_R3665
141.8
T-reg nTPM: 152.4
Samples: 4
Max nTPM: 227.5
Min nTPM: 93.1
RHH5301_R3667
93.1
RHH5237_R3609
227.5
RHH5266_R3638
152.3
RHH5209_R3580
136.5
Terminal effector memory CD4 T-cell nTPM: 166.7
Samples: 2
Max nTPM: 203.4
Min nTPM: 129.9
RHH5243_R3615
203.4
RHH5272_R3644
129.9
Terminal effector memory CD8 T-cell nTPM: 152.5
Samples: 4
Max nTPM: 281.4
Min nTPM: 62.0
RHH5232_R3604
145.9
RHH5204_R3575
120.6
RHH5261_R3633
281.4
RHH5296_R3662
62.0
Vd2 gdTCR nTPM: 157.1
Samples: 4
Max nTPM: 210.1
Min nTPM: 122.7
RHH5234_R3606
156.4
RHH5206_R3577
139.1
RHH5263_R3635
210.1
RHH5298_R3664
122.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
