HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.0 nTPM
HPA Brain:112.7 nTPM
GTEx:44.0 nTPM
FANTOM5:55.4 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:40.4 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.7
Sample id Sample description nTPM
Hippocampus
nTPM: 102.9
2148 Female, age 91, left hemisphere 114.1
1911 Female, age 85, right hemisphere 104.8
2621 Female, age 67, right hemisphere 103.9
2529 Female, age 94, left hemisphere 103.7
1898 Male, age 80, left hemisphere 99.2
1855 Male, age 76, left hemisphere 91.9
Dentate gyrus
nTPM: 102.3
2531 Female, age 67, both hemispheres 114.8
2530 Female, age 94, left hemisphere 106.4
2246 Female, age 85, both hemispheres 101.9
1927 Female, age 91, both hemispheres 101.4
2528 Male, age 74, both hemispheres 100.7
2010 Male, age 76, both hemispheres 88.7
Entorhinal gyrus
nTPM: 112.7
2764 Male, age 80, right hemisphere 132.2
2117 Female, age 91, right hemisphere 117.6
2613 Female, age 94, left hemisphere 114.6
1938 Female, age 85, left hemisphere 108.6
2686 Male, age 75, right hemisphere 104.7
1787 Male, age 76, left hemisphere 98.6
Hippocampus, CA1
nTPM: 102.7
2082 Female, age 91, right hemisphere 112.6
2749 Male, age 80, left hemisphere 108.2
1873 Female, age 85, both hemispheres 98.1
2527 Male, age 74, both hemispheres 98.1
2045 Male, age 76, both hemispheres 96.3
Hippocampus, CA2
nTPM: 104.1
1963 Male, age 80, left hemisphere 112.6
2113 Female, age 91, right hemisphere 108.1
2437 Female, age 94, left hemisphere 107.9
1940 Female, age 85, left hemisphere 107.7
2249 Male, age 74, both hemispheres 98.0
1892 Male, age 76, both hemispheres 90.0
Hippocampus, CA3
nTPM: 107.7
2620 Female, age 94, left hemisphere 122.3
2861 Female, age 67, both hemispheres 119.3
1891 Female, age 85, both hemispheres 107.6
2137 Male, age 80, left hemisphere 105.7
2436 Male, age 74, both hemispheres 96.5
1867 Male, age 76, both hemispheres 95.0
Parahippocampal cortex
nTPM: 105.2
1850 Male, age 80, both hemispheres 110.7
2692 Male, age 74, both hemispheres 110.6
1990 Female, age 91, right hemisphere 109.3
1933 Female, age 85, both hemispheres 108.0
2622 Female, age 67, right hemisphere 107.1
2693 Female, age 94, both hemispheres 107.0
2532 Female, age 72, left hemisphere 102.8
2245 Female, age 91, both hemispheres 101.3
2018 Male, age 76, both hemispheres 100.6
2250 Female, age 67, right hemisphere 94.8
Perirhinal gyrus
nTPM: 102.1
1794 Male, age 80, right hemisphere 110.5
1847 Female, age 91, left hemisphere 103.2
2521 Female, age 94, right hemisphere 103.2
1841 Female, age 85, right hemisphere 99.9
2848 Male, age 76, right hemisphere 93.4
Subiculum
nTPM: 106.4
1901 Male, age 80, both hemispheres 118.9
1977 Female, age 85, both hemispheres 111.3
2042 Male, age 76, both hemispheres 111.1
2729 Female, age 91, right hemisphere 103.2
2619 Male, age 74, both hemispheres 101.9
2438 Female, age 94, left hemisphere 92.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 88.4
Min nTPM: 22.2
Std nTPM: 10.2
Median nTPM: 42.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 88.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 79.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 76.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 76.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 75.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 74.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 74.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 66.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 65.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 63.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 63.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.4
FF:10153-102I9 76 years, female 70.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.4
Pig sample Sample description nTPM
Subiculum
nTPM: 38.0
Samples: 4

Max nTPM: 49.1
Min nTPM: 31.5
Sample A Female 49.1
Sample B Female 35.8
Sample C Male 35.6
Sample D Male 31.5
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 44.4
Min nTPM: 28.7
Sample A Female 44.4
Sample B Female 40.0
Sample C Male 39.7
Sample D Male 28.7
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 36.7
Sample A Female 45.9
Sample B Female 42.4
Sample C Male 40.6
Sample D Male 36.7
Ventral hippocampus
nTPM: 37.6
Samples: 4

Max nTPM: 46.4
Min nTPM: 29.1
Sample A Female 34.9
Sample B Female 29.1
Sample C Male 46.4
Sample D Male 40.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 42.3
Min nTPM: 37.9
Sample A Male 41.2
Sample B Male 40.0
Sample C Female 37.9
Sample D Female 42.3
Hippocampal formation
nTPM: 36.9
Samples: 4

Max nTPM: 39.5
Min nTPM: 35.2
Sample A Male 35.9
Sample B Male 37.1
Sample C Female 39.5
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
68158078 Antisense, RP_041116_02_G07, Mouse strain C57BL/6J (56 days, male) 7.9

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