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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.3
nTPM
Monaco:
62.1
nTPM
Schmiedel:
30.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.3
HPA sample
nTPM
gdT-cell nTPM: 58.8
Samples: 6
Max nTPM: 73.7
Min nTPM: 39.8
P10809_1007
39.8
P10809_1022
51.0
P10809_1041
55.9
P10809_1060
69.5
P10809_1077
73.7
P10809_1098
62.7
MAIT T-cell nTPM: 61.3
Samples: 6
Max nTPM: 83.7
Min nTPM: 42.6
P10809_1006
42.6
P10809_1024
64.1
P10809_1043
65.1
P10809_1062
48.9
P10809_1083
63.2
P10809_1097
83.7
Memory CD4 T-cell nTPM: 64.8
Samples: 6
Max nTPM: 71.4
Min nTPM: 48.3
P10809_1014
48.3
P10809_1026
63.7
P10809_1045
65.4
P10809_1064
70.0
P10809_1086
71.4
P10809_1113
70.0
Memory CD8 T-cell nTPM: 64.8
Samples: 5
Max nTPM: 82.9
Min nTPM: 53.7
P10809_1012
53.7
P10809_1027
82.9
P10809_1046
55.7
P10809_1065
70.2
P10809_1111
61.7
Naive CD4 T-cell nTPM: 58.6
Samples: 6
Max nTPM: 70.4
Min nTPM: 39.9
P10809_1015
39.9
P10809_1030
58.6
P10809_1049
70.4
P10809_1068
54.0
P10809_1085
68.1
P10809_1112
60.6
Naive CD8 T-cell nTPM: 67.4
Samples: 6
Max nTPM: 84.4
Min nTPM: 44.0
P10809_1016
44.0
P10809_1031
78.1
P10809_1050
65.7
P10809_1069
84.4
P10809_1087
76.8
P10809_1110
55.1
T-reg nTPM: 82.3
Samples: 6
Max nTPM: 101.0
Min nTPM: 58.6
P10809_1018
58.6
P10809_1037
101.0
P10809_1056
72.6
P10809_1075
69.6
P10809_1094
93.2
P10809_1106
98.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 65.4
Min nTPM: 20.6
RHH5202_R3573
36.7
RHH5230_R3602
20.6
RHH5259_R3631
34.7
RHH5288_R3660
65.4
Effector memory CD8 T-cell nTPM: 34.8
Samples: 4
Max nTPM: 44.6
Min nTPM: 20.5
RHH5203_R3574
38.5
RHH5231_R3603
44.6
RHH5260_R3632
35.6
RHH5289_R3661
20.5
MAIT T-cell nTPM: 35.9
Samples: 4
Max nTPM: 50.6
Min nTPM: 16.4
RHH5233_R3605
48.4
RHH5205_R3576
28.1
RHH5262_R3634
16.4
RHH5297_R3663
50.6
Memory CD4 T-cell TFH nTPM: 34.5
Samples: 4
Max nTPM: 43.5
Min nTPM: 21.9
RHH5300_R3666
38.5
RHH5236_R3608
43.5
RHH5265_R3637
21.9
RHH5208_R3579
34.2
Memory CD4 T-cell Th1 nTPM: 39.1
Samples: 4
Max nTPM: 65.6
Min nTPM: 22.5
RHH5210_R3581
22.5
RHH5302_R3668
65.6
RHH5238_R3610
40.4
RHH5267_R3639
27.7
Memory CD4 T-cell Th1/Th17 nTPM: 42.3
Samples: 4
Max nTPM: 69.8
Min nTPM: 15.6
RHH5303_R3669
69.8
RHH5211_R3582
46.4
RHH5239_R3611
15.6
RHH5268_R3640
37.4
Memory CD4 T-cell Th17 nTPM: 21.4
Samples: 4
Max nTPM: 27.5
Min nTPM: 13.0
RHH5304_R3670
24.9
RHH5212_R3583
27.5
RHH5240_R3612
20.3
RHH5269_R3641
13.0
Memory CD4 T-cell Th2 nTPM: 34.0
Samples: 4
Max nTPM: 44.3
Min nTPM: 22.9
RHH5305_R3671
41.4
RHH5213_R3584
27.4
RHH5241_R3613
44.3
RHH5270_R3642
22.9
Naive CD4 T-cell nTPM: 30.6
Samples: 4
Max nTPM: 52.1
Min nTPM: 17.3
RHH5306_R3672
28.3
RHH5214_R3585
52.1
RHH5242_R3614
24.7
RHH5271_R3643
17.3
Naive CD8 T-cell nTPM: 31.5
Samples: 4
Max nTPM: 48.6
Min nTPM: 18.6
RHH5201_R3572
32.2
RHH5229_R3601
18.6
RHH5258_R3630
48.6
RHH5287_R3659
26.4
Non-Vd2 gdTCR nTPM: 45.3
Samples: 4
Max nTPM: 58.7
Min nTPM: 16.1
RHH5235_R3607
16.1
RHH5264_R3636
58.7
RHH5207_R3578
50.4
RHH5299_R3665
56.0
T-reg nTPM: 38.8
Samples: 4
Max nTPM: 53.4
Min nTPM: 25.2
RHH5301_R3667
53.4
RHH5237_R3609
43.8
RHH5266_R3638
25.2
RHH5209_R3580
32.8
Terminal effector memory CD4 T-cell nTPM: 33.9
Samples: 2
Max nTPM: 41.8
Min nTPM: 25.9
RHH5243_R3615
25.9
RHH5272_R3644
41.8
Terminal effector memory CD8 T-cell nTPM: 62.1
Samples: 4
Max nTPM: 113.4
Min nTPM: 30.6
RHH5232_R3604
44.5
RHH5204_R3575
113.4
RHH5261_R3633
30.6
RHH5296_R3662
59.9
Vd2 gdTCR nTPM: 52.6
Samples: 4
Max nTPM: 81.5
Min nTPM: 34.3
RHH5234_R3606
38.1
RHH5206_R3577
81.5
RHH5263_R3635
34.3
RHH5298_R3664
56.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
