HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:53.4 nTPM
HPA Brain:164.6 nTPM
GTEx:53.4 nTPM
FANTOM5:63.7 Scaled Tags Per Million
Pig:37.4 nTPM
Mouse:151.0 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072961
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 164.6
Sample id Sample description nTPM
Hippocampus
nTPM: 129.1
2621 Female, age 67, right hemisphere 191.0
2148 Female, age 91, left hemisphere 177.2
1898 Male, age 80, left hemisphere 175.6
1855 Male, age 76, left hemisphere 117.7
1911 Female, age 85, right hemisphere 67.3
2529 Female, age 94, left hemisphere 45.8
Dentate gyrus
nTPM: 154.1
2530 Female, age 94, left hemisphere 263.1
1927 Female, age 91, both hemispheres 233.9
2010 Male, age 76, both hemispheres 173.8
2528 Male, age 74, both hemispheres 107.7
2246 Female, age 85, both hemispheres 93.8
2531 Female, age 67, both hemispheres 52.6
Entorhinal gyrus
nTPM: 36.2
2613 Female, age 94, left hemisphere 56.6
1938 Female, age 85, left hemisphere 41.6
1787 Male, age 76, left hemisphere 34.6
2686 Male, age 75, right hemisphere 32.0
2764 Male, age 80, right hemisphere 29.9
2117 Female, age 91, right hemisphere 22.5
Hippocampus, CA1
nTPM: 164.6
2749 Male, age 80, left hemisphere 358.8
1873 Female, age 85, both hemispheres 233.0
2527 Male, age 74, both hemispheres 129.4
2082 Female, age 91, right hemisphere 56.2
2045 Male, age 76, both hemispheres 45.6
Hippocampus, CA2
nTPM: 151.8
1963 Male, age 80, left hemisphere 497.3
1892 Male, age 76, both hemispheres 168.6
2249 Male, age 74, both hemispheres 89.4
2437 Female, age 94, left hemisphere 85.2
2113 Female, age 91, right hemisphere 46.7
1940 Female, age 85, left hemisphere 23.8
Hippocampus, CA3
nTPM: 85.7
2861 Female, age 67, both hemispheres 133.1
2137 Male, age 80, left hemisphere 114.3
2436 Male, age 74, both hemispheres 89.8
2620 Female, age 94, left hemisphere 70.4
1867 Male, age 76, both hemispheres 56.5
1891 Female, age 85, both hemispheres 50.0
Parahippocampal cortex
nTPM: 38.9
2245 Female, age 91, both hemispheres 59.1
2250 Female, age 67, right hemisphere 54.3
1990 Female, age 91, right hemisphere 47.4
2018 Male, age 76, both hemispheres 37.3
1850 Male, age 80, both hemispheres 35.9
2693 Female, age 94, both hemispheres 34.0
1933 Female, age 85, both hemispheres 31.7
2692 Male, age 74, both hemispheres 30.2
2532 Female, age 72, left hemisphere 29.4
2622 Female, age 67, right hemisphere 29.3
Perirhinal gyrus
nTPM: 37.1
1847 Female, age 91, left hemisphere 56.0
2521 Female, age 94, right hemisphere 38.4
1841 Female, age 85, right hemisphere 32.1
1794 Male, age 80, right hemisphere 31.7
2848 Male, age 76, right hemisphere 27.3
Subiculum
nTPM: 39.3
2729 Female, age 91, right hemisphere 53.6
1901 Male, age 80, both hemispheres 52.0
2042 Male, age 76, both hemispheres 37.2
1977 Female, age 85, both hemispheres 31.0
2438 Female, age 94, left hemisphere 30.9
2619 Male, age 74, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.4
Samples: 197

Max nTPM: 311.5
Min nTPM: 0.6
Std nTPM: 61.6
Median nTPM: 31.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 311.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 287.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 286.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 270.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 263.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 252.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 252.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 230.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 213.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 209.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 208.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.7
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 19.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.4
Pig sample Sample description nTPM
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 24.2
Min nTPM: 8.6
Sample A Female 24.2
Sample B Female 13.6
Sample C Male 12.7
Sample D Male 8.6
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 58.8
Min nTPM: 20.1
Sample A Female 58.8
Sample B Female 43.4
Sample C Male 27.4
Sample D Male 20.1
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 38.5
Min nTPM: 15.8
Sample A Female 15.8
Sample B Female 38.5
Sample C Male 17.3
Sample D Male 23.7
Ventral hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 58.8
Min nTPM: 15.7
Sample A Female 58.8
Sample B Female 17.7
Sample C Male 41.7
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 151.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.9
Samples: 4

Max nTPM: 87.8
Min nTPM: 66.4
Sample A Male 70.3
Sample B Male 66.4
Sample C Female 87.8
Sample D Female 67.1
Hippocampal formation
nTPM: 151.1
Samples: 4

Max nTPM: 169.0
Min nTPM: 130.8
Sample A Male 147.9
Sample B Male 156.5
Sample C Female 169.0
Sample D Female 130.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
69782385 Antisense, RP_050505_02_H08, Mouse strain C57BL/6J (56 days, male) 4.3
73520999 Antisense, RP_051101_02_H06, Mouse strain C57BL/6J (56 days, male) 3.0

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