We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.5
nTPM
Monaco:
193.1
nTPM
Schmiedel:
75.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.5
HPA sample
nTPM
gdT-cell nTPM: 37.1
Samples: 6
Max nTPM: 46.8
Min nTPM: 29.7
P10809_1007
29.7
P10809_1022
40.6
P10809_1041
33.0
P10809_1060
39.2
P10809_1077
33.0
P10809_1098
46.8
MAIT T-cell nTPM: 50.4
Samples: 6
Max nTPM: 68.3
Min nTPM: 41.5
P10809_1006
47.2
P10809_1024
68.3
P10809_1043
42.5
P10809_1062
41.5
P10809_1083
47.5
P10809_1097
55.6
Memory CD4 T-cell nTPM: 43.9
Samples: 6
Max nTPM: 50.6
Min nTPM: 37.0
P10809_1014
39.9
P10809_1026
47.6
P10809_1045
43.0
P10809_1064
37.0
P10809_1086
50.6
P10809_1113
45.0
Memory CD8 T-cell nTPM: 41.4
Samples: 5
Max nTPM: 49.2
Min nTPM: 36.0
P10809_1012
44.0
P10809_1027
40.8
P10809_1046
36.8
P10809_1065
36.0
P10809_1111
49.2
Naive CD4 T-cell nTPM: 31.7
Samples: 6
Max nTPM: 35.3
Min nTPM: 26.4
P10809_1015
31.6
P10809_1030
26.4
P10809_1049
35.3
P10809_1068
33.8
P10809_1085
30.1
P10809_1112
33.0
Naive CD8 T-cell nTPM: 35.0
Samples: 6
Max nTPM: 43.5
Min nTPM: 27.7
P10809_1016
27.7
P10809_1031
38.5
P10809_1050
35.0
P10809_1069
34.1
P10809_1087
43.5
P10809_1110
31.1
T-reg nTPM: 57.5
Samples: 6
Max nTPM: 66.6
Min nTPM: 48.1
P10809_1018
51.7
P10809_1037
66.6
P10809_1056
58.2
P10809_1075
61.6
P10809_1094
48.1
P10809_1106
58.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 146.4
Samples: 4
Max nTPM: 173.2
Min nTPM: 117.4
RHH5202_R3573
152.1
RHH5230_R3602
142.8
RHH5259_R3631
117.4
RHH5288_R3660
173.2
Effector memory CD8 T-cell nTPM: 161.3
Samples: 4
Max nTPM: 187.5
Min nTPM: 139.7
RHH5203_R3574
158.0
RHH5231_R3603
139.7
RHH5260_R3632
159.9
RHH5289_R3661
187.5
MAIT T-cell nTPM: 177.2
Samples: 4
Max nTPM: 211.8
Min nTPM: 125.6
RHH5233_R3605
211.8
RHH5205_R3576
125.6
RHH5262_R3634
185.0
RHH5297_R3663
186.2
Memory CD4 T-cell TFH nTPM: 177.0
Samples: 4
Max nTPM: 192.6
Min nTPM: 152.1
RHH5300_R3666
178.0
RHH5236_R3608
152.1
RHH5265_R3637
192.6
RHH5208_R3579
185.2
Memory CD4 T-cell Th1 nTPM: 123.8
Samples: 4
Max nTPM: 156.2
Min nTPM: 89.6
RHH5210_R3581
118.1
RHH5302_R3668
156.2
RHH5238_R3610
89.6
RHH5267_R3639
131.1
Memory CD4 T-cell Th1/Th17 nTPM: 140.5
Samples: 4
Max nTPM: 209.1
Min nTPM: 80.9
RHH5303_R3669
209.1
RHH5211_R3582
145.6
RHH5239_R3611
80.9
RHH5268_R3640
126.5
Memory CD4 T-cell Th17 nTPM: 156.7
Samples: 4
Max nTPM: 192.2
Min nTPM: 129.6
RHH5304_R3670
171.6
RHH5212_R3583
192.2
RHH5240_R3612
129.6
RHH5269_R3641
133.3
Memory CD4 T-cell Th2 nTPM: 149.8
Samples: 4
Max nTPM: 164.3
Min nTPM: 127.8
RHH5305_R3671
145.7
RHH5213_R3584
161.2
RHH5241_R3613
164.3
RHH5270_R3642
127.8
Naive CD4 T-cell nTPM: 124.2
Samples: 4
Max nTPM: 140.9
Min nTPM: 100.2
RHH5306_R3672
140.9
RHH5214_R3585
134.1
RHH5242_R3614
100.2
RHH5271_R3643
121.7
Naive CD8 T-cell nTPM: 127.1
Samples: 4
Max nTPM: 173.2
Min nTPM: 88.0
RHH5201_R3572
173.2
RHH5229_R3601
88.0
RHH5258_R3630
132.2
RHH5287_R3659
114.9
Non-Vd2 gdTCR nTPM: 153.6
Samples: 4
Max nTPM: 202.7
Min nTPM: 100.6
RHH5235_R3607
100.6
RHH5264_R3636
192.6
RHH5207_R3578
202.7
RHH5299_R3665
118.4
T-reg nTPM: 137.2
Samples: 4
Max nTPM: 169.2
Min nTPM: 118.2
RHH5301_R3667
169.2
RHH5237_R3609
141.6
RHH5266_R3638
119.6
RHH5209_R3580
118.2
Terminal effector memory CD4 T-cell nTPM: 193.2
Samples: 2
Max nTPM: 282.0
Min nTPM: 104.3
RHH5243_R3615
104.3
RHH5272_R3644
282.0
Terminal effector memory CD8 T-cell nTPM: 146.7
Samples: 4
Max nTPM: 161.4
Min nTPM: 130.4
RHH5232_R3604
130.4
RHH5204_R3575
151.3
RHH5261_R3633
143.5
RHH5296_R3662
161.4
Vd2 gdTCR nTPM: 179.3
Samples: 4
Max nTPM: 196.0
Min nTPM: 164.3
RHH5234_R3606
176.0
RHH5206_R3577
180.9
RHH5263_R3635
196.0
RHH5298_R3664
164.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
