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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
178.1
nTPM
Monaco:
103.3
nTPM
Schmiedel:
98.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.1
HPA sample
nTPM
gdT-cell nTPM: 81.7
Samples: 6
Max nTPM: 116.4
Min nTPM: 60.9
P10809_1007
60.9
P10809_1022
90.9
P10809_1041
116.4
P10809_1060
69.1
P10809_1077
66.2
P10809_1098
86.6
MAIT T-cell nTPM: 112.3
Samples: 6
Max nTPM: 140.7
Min nTPM: 81.0
P10809_1006
81.5
P10809_1024
117.7
P10809_1043
140.7
P10809_1062
129.8
P10809_1083
81.0
P10809_1097
123.1
Memory CD4 T-cell nTPM: 130.9
Samples: 6
Max nTPM: 159.6
Min nTPM: 95.8
P10809_1014
111.3
P10809_1026
159.6
P10809_1045
149.1
P10809_1064
128.7
P10809_1086
95.8
P10809_1113
140.7
Memory CD8 T-cell nTPM: 96.4
Samples: 5
Max nTPM: 118.4
Min nTPM: 84.1
P10809_1012
90.5
P10809_1027
84.1
P10809_1046
118.4
P10809_1065
88.2
P10809_1111
100.6
Naive CD4 T-cell nTPM: 155.9
Samples: 6
Max nTPM: 216.9
Min nTPM: 111.8
P10809_1015
111.8
P10809_1030
145.4
P10809_1049
216.9
P10809_1068
168.8
P10809_1085
135.8
P10809_1112
156.4
Naive CD8 T-cell nTPM: 114.9
Samples: 6
Max nTPM: 145.5
Min nTPM: 65.7
P10809_1016
120.3
P10809_1031
126.7
P10809_1050
107.8
P10809_1069
145.5
P10809_1087
65.7
P10809_1110
123.1
T-reg nTPM: 178.1
Samples: 6
Max nTPM: 260.5
Min nTPM: 134.7
P10809_1018
135.6
P10809_1037
134.7
P10809_1056
260.5
P10809_1075
178.7
P10809_1094
185.7
P10809_1106
173.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.8
Samples: 4
Max nTPM: 107.6
Min nTPM: 42.8
RHH5202_R3573
96.3
RHH5230_R3602
64.4
RHH5259_R3631
42.8
RHH5288_R3660
107.6
Effector memory CD8 T-cell nTPM: 45.3
Samples: 4
Max nTPM: 68.2
Min nTPM: 28.5
RHH5203_R3574
68.2
RHH5231_R3603
42.7
RHH5260_R3632
28.5
RHH5289_R3661
41.8
MAIT T-cell nTPM: 72.6
Samples: 4
Max nTPM: 90.5
Min nTPM: 48.2
RHH5233_R3605
71.0
RHH5205_R3576
48.2
RHH5262_R3634
90.5
RHH5297_R3663
80.7
Memory CD4 T-cell TFH nTPM: 94.1
Samples: 4
Max nTPM: 117.2
Min nTPM: 77.5
RHH5300_R3666
117.2
RHH5236_R3608
77.5
RHH5265_R3637
87.0
RHH5208_R3579
94.7
Memory CD4 T-cell Th1 nTPM: 91.0
Samples: 4
Max nTPM: 124.9
Min nTPM: 53.1
RHH5210_R3581
123.4
RHH5302_R3668
124.9
RHH5238_R3610
62.7
RHH5267_R3639
53.1
Memory CD4 T-cell Th1/Th17 nTPM: 74.8
Samples: 4
Max nTPM: 119.3
Min nTPM: 26.0
RHH5303_R3669
97.7
RHH5211_R3582
119.3
RHH5239_R3611
26.0
RHH5268_R3640
56.3
Memory CD4 T-cell Th17 nTPM: 68.8
Samples: 4
Max nTPM: 108.9
Min nTPM: 49.7
RHH5304_R3670
61.4
RHH5212_R3583
108.9
RHH5240_R3612
55.0
RHH5269_R3641
49.7
Memory CD4 T-cell Th2 nTPM: 103.3
Samples: 4
Max nTPM: 142.1
Min nTPM: 87.6
RHH5305_R3671
87.6
RHH5213_R3584
93.1
RHH5241_R3613
142.1
RHH5270_R3642
90.4
Naive CD4 T-cell nTPM: 87.8
Samples: 4
Max nTPM: 112.9
Min nTPM: 59.6
RHH5306_R3672
112.9
RHH5214_R3585
99.8
RHH5242_R3614
78.8
RHH5271_R3643
59.6
Naive CD8 T-cell nTPM: 97.2
Samples: 4
Max nTPM: 133.5
Min nTPM: 48.0
RHH5201_R3572
106.1
RHH5229_R3601
48.0
RHH5258_R3630
133.5
RHH5287_R3659
101.0
Non-Vd2 gdTCR nTPM: 51.1
Samples: 4
Max nTPM: 72.5
Min nTPM: 43.3
RHH5235_R3607
45.2
RHH5264_R3636
43.3
RHH5207_R3578
43.3
RHH5299_R3665
72.5
T-reg nTPM: 71.9
Samples: 4
Max nTPM: 107.5
Min nTPM: 51.1
RHH5301_R3667
107.5
RHH5237_R3609
73.0
RHH5266_R3638
51.1
RHH5209_R3580
56.1
Terminal effector memory CD4 T-cell nTPM: 54.7
Samples: 2
Max nTPM: 82.3
Min nTPM: 27.1
RHH5243_R3615
27.1
RHH5272_R3644
82.3
Terminal effector memory CD8 T-cell nTPM: 62.8
Samples: 4
Max nTPM: 76.4
Min nTPM: 28.5
RHH5232_R3604
76.4
RHH5204_R3575
74.4
RHH5261_R3633
28.5
RHH5296_R3662
71.8
Vd2 gdTCR nTPM: 61.6
Samples: 4
Max nTPM: 79.4
Min nTPM: 41.3
RHH5234_R3606
63.6
RHH5206_R3577
62.1
RHH5263_R3635
41.3
RHH5298_R3664
79.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
