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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
149.2
nTPM
FANTOM5:
150.5
Scaled Tags Per Million
Pig:
87.8
nTPM
Allen mouse:
1.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
149.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 88.4
1984
Male, age 76, both hemispheres
96.2
2301
Female, age 85, both hemispheres
92.4
2188
Female, age 91, both hemispheres
85.2
2090
Male, age 80, both hemispheres
79.8
Dorsal cochlear nucleus nTPM: 88.9
2802
Male, age 74, right hemisphere
103.4
2187
Female, age 91, both hemispheres
100.6
2058
Male, age 76, both hemispheres
91.4
2370
Male, age 61, both hemispheres
84.7
2378
Male, age 80, both hemispheres
64.4
Dorsal tegmental nucleus nTPM: 101.2
2083
Male, age 80, both hemispheres
124.3
2358
Male, age 61, both hemispheres
109.2
1936
Male, age 76, left hemisphere
92.4
2326
Male, age 74, both hemispheres
78.8
Dorsolateral tegmental area nTPM: 87.9
2654
Male, age 80, both hemispheres
109.6
2141
Male, age 76, both hemispheres
97.5
2751
Female, age 85, both hemispheres
85.6
2337
Male, age 61, both hemispheres
79.7
2360
Male, age 74, both hemispheres
67.1
Kolliker-Fuse nucleus nTPM: 106.0
2163
Male, age 80, both hemispheres
127.9
2793
Female, age 91, left hemisphere
105.0
2315
Male, age 76, right hemisphere
85.0
Lateral lemniscal nuclei nTPM: 112.7
2453
Male, age 74, right hemisphere
137.6
2169
Male, age 76, both hemispheres
137.4
2746
Female, age 85, left hemisphere
126.1
2320
Female, age 91, left hemisphere
87.4
2036
Male, age 80, both hemispheres
75.2
Lateral parabrachial nucleus nTPM: 100.9
2139
Female, age 85, right hemisphere
146.6
2790
Male, age 61, both hemispheres
94.6
2013
Male, age 80, both hemispheres
93.4
2792
Male, age 76, both hemispheres
69.1
Lateral vestibular nucleus nTPM: 109.6
2184
Male, age 76, both hemispheres
126.7
2311
Male, age 80, both hemispheres
92.4
Locus coeruleus nTPM: 149.2
2123
Female, age 91, both hemispheres
177.0
2014
Male, age 55, unknown
171.8
2720
Male, age 74, both hemispheres
169.6
1980
Male, age 76, both hemispheres
150.9
2317
Female, age 72, unknown
140.8
2162
Male, age 80, both hemispheres
123.6
2788
Male, age 74, unknown
111.1
Medial parabrachial nucleus nTPM: 101.1
2156
Male, age 61, both hemispheres
112.7
2854
Male, age 80, both hemispheres
106.6
2170
Female, age 91, both hemispheres
102.5
2786
Male, age 76, both hemispheres
96.2
2463
Female, age 85, right hemisphere
87.8
Medial periolivary nuclei nTPM: 114.5
2171
Female, age 85, both hemispheres
170.3
2063
Male, age 76, both hemispheres
144.3
2791
Male, age 74, right hemisphere
91.0
2458
Female, age 91, both hemispheres
89.6
2081
Male, age 80, both hemispheres
77.1
Motor facial nucleus nTPM: 120.8
2062
Male, age 76, both hemispheres
162.1
2697
Female, age 85, both hemispheres
129.6
2327
Male, age 80, both hemispheres
122.0
2365
Male, age 74, right hemisphere
115.9
2795
Female, age 91, both hemispheres
101.6
2126
Male, age 61, both hemispheres
93.6
Motor trigeminal nucleus nTPM: 106.7
2079
Male, age 80, both hemispheres
117.4
2335
Male, age 61, both hemispheres
113.5
2560
Male, age 74, both hemispheres
108.8
2309
Male, age 76, both hemispheres
108.1
2321
Female, age 91, both hemispheres
85.8
Nuclei of the trapezoid body nTPM: 132.2
2735
Female, age 85, both hemispheres
161.8
1983
Male, age 76, both hemispheres
157.2
2159
Male, age 61, both hemispheres
148.5
2166
Male, age 80, both hemispheres
111.9
2368
Female, age 91, both hemispheres
81.6
Nucleus raphe magnus nTPM: 142.6
2160
Male, age 61, both hemispheres
194.5
2172
Female, age 85, both hemispheres
182.4
2455
Male, age 74, both hemispheres
153.3
2328
Male, age 80, both hemispheres
129.8
2051
Male, age 76, both hemispheres
111.6
2459
Female, age 91, both hemispheres
84.0
Paramedian reticular nucleus nTPM: 109.7
2050
Female, age 85, both hemispheres
137.5
2057
Male, age 80, both hemispheres
117.7
2313
Male, age 61, both hemispheres
116.5
2052
Male, age 76, both hemispheres
67.0
Pedunculopontine tegmental nucleus nTPM: 102.3
2334
Male, age 80, both hemispheres
114.1
1921
Female, age 85, both hemispheres
101.1
2338
Male, age 61, both hemispheres
91.7
Pontine nuclei nTPM: 136.4
2787
Female, age 85, both hemispheres
221.6
1863
Male, age 55, unknown
160.7
2727
Male, age 61, right hemisphere
149.4
1968
Male, age 76, left hemisphere
145.3
2109
Female, age 72, unknown
138.4
2115
Male, age 80, left hemisphere
101.0
2454
Male, age 74, left hemisphere
97.1
2319
Female, age 91, both hemispheres
78.0
Pontine raphe nucleus nTPM: 121.4
2122
Female, age 85, midline
138.9
2853
Male, age 76, midline
103.9
Posteroventral cochlear nucleus nTPM: 88.2
2752
Female, age 85, both hemispheres
115.5
2070
Male, age 76, both hemispheres
108.1
2371
Male, age 61, both hemispheres
82.4
2341
Male, age 80, both hemispheres
76.2
2135
Female, age 91, both hemispheres
58.6
Principal sensory trigeminal nucleus nTPM: 118.8
2158
Male, age 61, both hemispheres
163.0
2008
Male, age 80, left hemisphere
121.1
2324
Male, age 76, both hemispheres
114.1
2367
Female, age 91, left hemisphere
77.1
Reticular pontine nucleus, caudal nTPM: 113.8
2332
Male, age 80, right hemisphere
137.8
2092
Male, age 76, both hemispheres
127.5
2559
Male, age 74, both hemispheres
96.1
2457
Female, age 91, both hemispheres
93.6
Reticular pontine nucleus, oral nTPM: 96.1
2012
Female, age 85, both hemispheres
115.6
1939
Male, age 80, both hemispheres
105.7
2167
Male, age 76, both hemispheres
95.0
2366
Female, age 91, both hemispheres
87.7
2361
Male, age 74, both hemispheres
76.5
Reticulotegmental nucleus nTPM: 112.5
2325
Male, age 76, both hemispheres
127.4
2452
Male, age 74, both hemispheres
110.7
2333
Male, age 80, both hemispheres
110.2
2322
Female, age 91, both hemispheres
101.8
Spinal trigeminal nucleus, oral nTPM: 114.4
2164
Male, age 80, both hemispheres
126.5
2737
Female, age 85, both hemispheres
117.1
1978
Male, age 76, both hemispheres
99.7
Subcoeruleus area nTPM: 104.8
2323
Female, age 91, left hemisphere
129.6
1958
Male, age 80, both hemispheres
123.0
2089
Male, age 76, left hemisphere
105.1
2451
Male, age 74, both hemispheres
93.6
2369
Female, age 85, left hemisphere
72.8
Superior olive nTPM: 112.4
1875
Female, age 85, both hemispheres
138.4
2020
Male, age 76, both hemispheres
115.9
2329
Male, age 80, right hemisphere
110.2
2561
Female, age 91, both hemispheres
103.4
2364
Male, age 74, right hemisphere
94.4
Ventral periolivary nuclei nTPM: 123.8
2165
Male, age 80, both hemispheres
153.5
2130
Female, age 85, both hemispheres
143.0
2794
Female, age 91, left hemisphere
99.8
2023
Male, age 76, both hemispheres
98.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 106.7
2449
Male, age 74, both hemispheres
141.8
2840
Female, age 85, both hemispheres
112.7
1959
Male, age 76, both hemispheres
112.6
2161
Male, age 80, both hemispheres
103.7
2359
Male, age 61, both hemispheres
92.9
2456
Female, age 91, both hemispheres
76.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
87.8
Pig sample
Sample description
nTPM
Pons nTPM: 87.8
Samples: 4
Max nTPM: 102.2
Min nTPM: 67.0
Sample A
Female
102.2
Sample B
Female
67.0
Sample C
Male
82.9
Sample D
Male
99.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
