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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.0
nTPM
Monaco:
17.2
nTPM
Schmiedel:
68.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.0
HPA sample
nTPM
gdT-cell nTPM: 13.7
Samples: 6
Max nTPM: 20.0
Min nTPM: 8.2
P10809_1007
14.5
P10809_1022
13.8
P10809_1041
20.0
P10809_1060
8.2
P10809_1077
14.0
P10809_1098
11.4
MAIT T-cell nTPM: 7.1
Samples: 6
Max nTPM: 15.5
Min nTPM: 3.6
P10809_1006
5.0
P10809_1024
3.6
P10809_1043
8.9
P10809_1062
3.8
P10809_1083
5.5
P10809_1097
15.5
Memory CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 18.9
Min nTPM: 7.5
P10809_1014
11.9
P10809_1026
10.3
P10809_1045
18.9
P10809_1064
13.8
P10809_1086
9.3
P10809_1113
7.5
Memory CD8 T-cell nTPM: 13.2
Samples: 5
Max nTPM: 21.5
Min nTPM: 10.2
P10809_1012
10.2
P10809_1027
11.9
P10809_1046
21.5
P10809_1065
11.9
P10809_1111
10.7
Naive CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 29.8
Min nTPM: 0.7
P10809_1015
6.8
P10809_1030
11.1
P10809_1049
29.8
P10809_1068
7.3
P10809_1085
0.7
P10809_1112
4.6
Naive CD8 T-cell nTPM: 10.0
Samples: 6
Max nTPM: 15.0
Min nTPM: 5.4
P10809_1016
5.4
P10809_1031
9.2
P10809_1050
9.7
P10809_1069
15.0
P10809_1087
9.4
P10809_1110
11.4
T-reg nTPM: 25.0
Samples: 6
Max nTPM: 61.0
Min nTPM: 12.3
P10809_1018
19.4
P10809_1037
12.3
P10809_1056
61.0
P10809_1075
24.5
P10809_1094
18.6
P10809_1106
14.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.4
Samples: 4
Max nTPM: 20.1
Min nTPM: 0.8
RHH5202_R3573
0.8
RHH5230_R3602
20.1
RHH5259_R3631
13.6
RHH5288_R3660
7.0
Effector memory CD8 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 21.4
Min nTPM: 3.1
RHH5203_R3574
11.1
RHH5231_R3603
21.4
RHH5260_R3632
12.6
RHH5289_R3661
3.1
MAIT T-cell nTPM: 9.4
Samples: 4
Max nTPM: 14.4
Min nTPM: 3.6
RHH5233_R3605
3.6
RHH5205_R3576
8.6
RHH5262_R3634
14.4
RHH5297_R3663
10.8
Memory CD4 T-cell TFH nTPM: 13.4
Samples: 4
Max nTPM: 26.2
Min nTPM: 3.6
RHH5300_R3666
14.8
RHH5236_R3608
26.2
RHH5265_R3637
8.9
RHH5208_R3579
3.6
Memory CD4 T-cell Th1 nTPM: 17.2
Samples: 4
Max nTPM: 22.0
Min nTPM: 13.4
RHH5210_R3581
14.1
RHH5302_R3668
22.0
RHH5238_R3610
19.1
RHH5267_R3639
13.4
Memory CD4 T-cell Th1/Th17 nTPM: 11.9
Samples: 4
Max nTPM: 20.1
Min nTPM: 2.7
RHH5303_R3669
2.7
RHH5211_R3582
18.5
RHH5239_R3611
6.3
RHH5268_R3640
20.1
Memory CD4 T-cell Th17 nTPM: 10.8
Samples: 4
Max nTPM: 20.8
Min nTPM: 2.0
RHH5304_R3670
7.8
RHH5212_R3583
20.8
RHH5240_R3612
2.0
RHH5269_R3641
12.7
Memory CD4 T-cell Th2 nTPM: 13.5
Samples: 4
Max nTPM: 22.1
Min nTPM: 7.1
RHH5305_R3671
22.1
RHH5213_R3584
8.9
RHH5241_R3613
7.1
RHH5270_R3642
15.7
Naive CD4 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 16.8
Min nTPM: 9.1
RHH5306_R3672
16.2
RHH5214_R3585
11.0
RHH5242_R3614
16.8
RHH5271_R3643
9.1
Naive CD8 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 16.8
Min nTPM: 3.5
RHH5201_R3572
3.5
RHH5229_R3601
6.8
RHH5258_R3630
16.8
RHH5287_R3659
8.1
Non-Vd2 gdTCR nTPM: 11.2
Samples: 4
Max nTPM: 29.3
Min nTPM: 2.3
RHH5235_R3607
5.1
RHH5264_R3636
8.1
RHH5207_R3578
2.3
RHH5299_R3665
29.3
T-reg nTPM: 17.2
Samples: 4
Max nTPM: 26.0
Min nTPM: 9.6
RHH5301_R3667
26.0
RHH5237_R3609
21.7
RHH5266_R3638
11.6
RHH5209_R3580
9.6
Terminal effector memory CD4 T-cell nTPM: 5.5
Samples: 2
Max nTPM: 7.9
Min nTPM: 3.1
RHH5243_R3615
7.9
RHH5272_R3644
3.1
Terminal effector memory CD8 T-cell nTPM: 14.6
Samples: 4
Max nTPM: 33.1
Min nTPM: 3.6
RHH5232_R3604
3.6
RHH5204_R3575
33.1
RHH5261_R3633
13.0
RHH5296_R3662
8.8
Vd2 gdTCR nTPM: 16.5
Samples: 4
Max nTPM: 29.7
Min nTPM: 9.0
RHH5234_R3606
9.0
RHH5206_R3577
15.5
RHH5263_R3635
11.7
RHH5298_R3664
29.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
