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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
287.4
nTPM
Monaco:
553.0
nTPM
Schmiedel:
319.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
287.4
HPA sample
nTPM
gdT-cell nTPM: 238.2
Samples: 6
Max nTPM: 265.8
Min nTPM: 183.6
P10809_1007
183.6
P10809_1022
265.8
P10809_1041
247.4
P10809_1060
265.5
P10809_1077
216.6
P10809_1098
250.3
MAIT T-cell nTPM: 170.0
Samples: 6
Max nTPM: 198.9
Min nTPM: 126.2
P10809_1006
126.2
P10809_1024
151.7
P10809_1043
180.0
P10809_1062
198.9
P10809_1083
165.7
P10809_1097
197.7
Memory CD4 T-cell nTPM: 202.0
Samples: 6
Max nTPM: 217.5
Min nTPM: 176.1
P10809_1014
176.1
P10809_1026
211.1
P10809_1045
206.8
P10809_1064
217.5
P10809_1086
191.6
P10809_1113
209.0
Memory CD8 T-cell nTPM: 208.3
Samples: 5
Max nTPM: 240.6
Min nTPM: 182.5
P10809_1012
183.2
P10809_1027
210.9
P10809_1046
240.6
P10809_1065
182.5
P10809_1111
224.2
Naive CD4 T-cell nTPM: 207.3
Samples: 6
Max nTPM: 248.1
Min nTPM: 147.7
P10809_1015
147.7
P10809_1030
179.0
P10809_1049
248.1
P10809_1068
244.5
P10809_1085
194.3
P10809_1112
230.1
Naive CD8 T-cell nTPM: 192.6
Samples: 6
Max nTPM: 223.3
Min nTPM: 167.6
P10809_1016
167.6
P10809_1031
201.7
P10809_1050
185.7
P10809_1069
223.3
P10809_1087
185.7
P10809_1110
191.6
T-reg nTPM: 287.4
Samples: 6
Max nTPM: 354.3
Min nTPM: 227.5
P10809_1018
292.2
P10809_1037
227.5
P10809_1056
354.3
P10809_1075
274.2
P10809_1094
327.1
P10809_1106
248.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
553.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 446.0
Samples: 4
Max nTPM: 501.6
Min nTPM: 357.1
RHH5202_R3573
452.5
RHH5230_R3602
472.9
RHH5259_R3631
357.1
RHH5288_R3660
501.6
Effector memory CD8 T-cell nTPM: 548.0
Samples: 4
Max nTPM: 616.5
Min nTPM: 499.3
RHH5203_R3574
547.5
RHH5231_R3603
528.6
RHH5260_R3632
499.3
RHH5289_R3661
616.5
MAIT T-cell nTPM: 418.3
Samples: 4
Max nTPM: 468.4
Min nTPM: 392.6
RHH5233_R3605
394.6
RHH5205_R3576
392.6
RHH5262_R3634
468.4
RHH5297_R3663
417.4
Memory CD4 T-cell TFH nTPM: 497.1
Samples: 4
Max nTPM: 524.2
Min nTPM: 472.7
RHH5300_R3666
524.2
RHH5236_R3608
472.7
RHH5265_R3637
503.8
RHH5208_R3579
487.6
Memory CD4 T-cell Th1 nTPM: 416.0
Samples: 4
Max nTPM: 455.8
Min nTPM: 331.9
RHH5210_R3581
437.1
RHH5302_R3668
439.0
RHH5238_R3610
331.9
RHH5267_R3639
455.8
Memory CD4 T-cell Th1/Th17 nTPM: 400.6
Samples: 4
Max nTPM: 506.4
Min nTPM: 293.9
RHH5303_R3669
506.4
RHH5211_R3582
409.0
RHH5239_R3611
293.9
RHH5268_R3640
393.2
Memory CD4 T-cell Th17 nTPM: 438.6
Samples: 4
Max nTPM: 491.9
Min nTPM: 405.0
RHH5304_R3670
443.3
RHH5212_R3583
414.3
RHH5240_R3612
491.9
RHH5269_R3641
405.0
Memory CD4 T-cell Th2 nTPM: 463.5
Samples: 4
Max nTPM: 497.6
Min nTPM: 416.1
RHH5305_R3671
462.3
RHH5213_R3584
478.1
RHH5241_R3613
416.1
RHH5270_R3642
497.6
Naive CD4 T-cell nTPM: 473.9
Samples: 4
Max nTPM: 550.6
Min nTPM: 397.7
RHH5306_R3672
550.6
RHH5214_R3585
444.5
RHH5242_R3614
397.7
RHH5271_R3643
502.9
Naive CD8 T-cell nTPM: 347.5
Samples: 4
Max nTPM: 455.5
Min nTPM: 232.3
RHH5201_R3572
258.4
RHH5229_R3601
232.3
RHH5258_R3630
455.5
RHH5287_R3659
443.7
Non-Vd2 gdTCR nTPM: 552.9
Samples: 4
Max nTPM: 617.0
Min nTPM: 511.8
RHH5235_R3607
511.8
RHH5264_R3636
617.0
RHH5207_R3578
560.3
RHH5299_R3665
522.6
T-reg nTPM: 458.5
Samples: 4
Max nTPM: 477.1
Min nTPM: 422.5
RHH5301_R3667
477.1
RHH5237_R3609
468.7
RHH5266_R3638
465.5
RHH5209_R3580
422.5
Terminal effector memory CD4 T-cell nTPM: 477.7
Samples: 2
Max nTPM: 543.7
Min nTPM: 411.7
RHH5243_R3615
411.7
RHH5272_R3644
543.7
Terminal effector memory CD8 T-cell nTPM: 522.3
Samples: 4
Max nTPM: 593.6
Min nTPM: 470.6
RHH5232_R3604
536.1
RHH5204_R3575
470.6
RHH5261_R3633
488.8
RHH5296_R3662
593.6
Vd2 gdTCR nTPM: 456.0
Samples: 4
Max nTPM: 490.7
Min nTPM: 430.6
RHH5234_R3606
430.6
RHH5206_R3577
469.9
RHH5263_R3635
490.7
RHH5298_R3664
432.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.