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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.0
nTPM
Monaco:
56.0
nTPM
Schmiedel:
19.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.0
HPA sample
nTPM
gdT-cell nTPM: 63.4
Samples: 6
Max nTPM: 70.5
Min nTPM: 48.6
P10809_1007
48.6
P10809_1022
67.8
P10809_1041
59.9
P10809_1060
69.6
P10809_1077
64.1
P10809_1098
70.5
MAIT T-cell nTPM: 59.3
Samples: 6
Max nTPM: 69.0
Min nTPM: 47.7
P10809_1006
47.7
P10809_1024
58.8
P10809_1043
69.0
P10809_1062
63.0
P10809_1083
51.9
P10809_1097
65.1
Memory CD4 T-cell nTPM: 72.7
Samples: 6
Max nTPM: 84.2
Min nTPM: 59.5
P10809_1014
67.0
P10809_1026
76.3
P10809_1045
59.5
P10809_1064
76.0
P10809_1086
73.3
P10809_1113
84.2
Memory CD8 T-cell nTPM: 65.6
Samples: 5
Max nTPM: 76.7
Min nTPM: 54.9
P10809_1012
54.9
P10809_1027
63.2
P10809_1046
56.9
P10809_1065
76.4
P10809_1111
76.7
Naive CD4 T-cell nTPM: 79.2
Samples: 6
Max nTPM: 91.3
Min nTPM: 61.2
P10809_1015
61.2
P10809_1030
91.2
P10809_1049
91.3
P10809_1068
67.2
P10809_1085
83.2
P10809_1112
81.0
Naive CD8 T-cell nTPM: 71.2
Samples: 6
Max nTPM: 86.4
Min nTPM: 54.4
P10809_1016
69.6
P10809_1031
54.4
P10809_1050
74.6
P10809_1069
77.5
P10809_1087
64.7
P10809_1110
86.4
T-reg nTPM: 116.0
Samples: 6
Max nTPM: 139.2
Min nTPM: 82.4
P10809_1018
82.4
P10809_1037
110.2
P10809_1056
139.2
P10809_1075
118.8
P10809_1094
107.8
P10809_1106
137.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.7
Samples: 4
Max nTPM: 71.0
Min nTPM: 23.6
RHH5202_R3573
54.9
RHH5230_R3602
37.3
RHH5259_R3631
23.6
RHH5288_R3660
71.0
Effector memory CD8 T-cell nTPM: 32.9
Samples: 4
Max nTPM: 42.3
Min nTPM: 27.3
RHH5203_R3574
34.3
RHH5231_R3603
27.3
RHH5260_R3632
42.3
RHH5289_R3661
27.8
MAIT T-cell nTPM: 34.9
Samples: 4
Max nTPM: 65.7
Min nTPM: 17.3
RHH5233_R3605
37.5
RHH5205_R3576
19.2
RHH5262_R3634
17.3
RHH5297_R3663
65.7
Memory CD4 T-cell TFH nTPM: 50.4
Samples: 4
Max nTPM: 62.1
Min nTPM: 40.4
RHH5300_R3666
62.1
RHH5236_R3608
57.4
RHH5265_R3637
41.5
RHH5208_R3579
40.4
Memory CD4 T-cell Th1 nTPM: 50.2
Samples: 4
Max nTPM: 79.8
Min nTPM: 31.2
RHH5210_R3581
36.0
RHH5302_R3668
79.8
RHH5238_R3610
53.8
RHH5267_R3639
31.2
Memory CD4 T-cell Th1/Th17 nTPM: 39.5
Samples: 4
Max nTPM: 54.9
Min nTPM: 21.7
RHH5303_R3669
54.9
RHH5211_R3582
42.7
RHH5239_R3611
21.7
RHH5268_R3640
38.7
Memory CD4 T-cell Th17 nTPM: 23.9
Samples: 4
Max nTPM: 31.2
Min nTPM: 19.1
RHH5304_R3670
31.2
RHH5212_R3583
23.1
RHH5240_R3612
19.1
RHH5269_R3641
22.0
Memory CD4 T-cell Th2 nTPM: 42.2
Samples: 4
Max nTPM: 49.2
Min nTPM: 32.0
RHH5305_R3671
49.2
RHH5213_R3584
41.8
RHH5241_R3613
45.8
RHH5270_R3642
32.0
Naive CD4 T-cell nTPM: 56.1
Samples: 4
Max nTPM: 68.8
Min nTPM: 44.3
RHH5306_R3672
64.9
RHH5214_R3585
68.8
RHH5242_R3614
44.3
RHH5271_R3643
46.2
Naive CD8 T-cell nTPM: 43.3
Samples: 4
Max nTPM: 66.8
Min nTPM: 24.8
RHH5201_R3572
31.5
RHH5229_R3601
24.8
RHH5258_R3630
66.8
RHH5287_R3659
50.0
Non-Vd2 gdTCR nTPM: 41.5
Samples: 4
Max nTPM: 73.2
Min nTPM: 21.9
RHH5235_R3607
21.9
RHH5264_R3636
37.5
RHH5207_R3578
33.4
RHH5299_R3665
73.2
T-reg nTPM: 48.3
Samples: 4
Max nTPM: 74.4
Min nTPM: 29.6
RHH5301_R3667
74.4
RHH5237_R3609
55.1
RHH5266_R3638
33.9
RHH5209_R3580
29.6
Terminal effector memory CD4 T-cell nTPM: 43.4
Samples: 2
Max nTPM: 54.4
Min nTPM: 32.4
RHH5243_R3615
32.4
RHH5272_R3644
54.4
Terminal effector memory CD8 T-cell nTPM: 34.8
Samples: 4
Max nTPM: 59.0
Min nTPM: 20.4
RHH5232_R3604
20.4
RHH5204_R3575
59.0
RHH5261_R3633
29.2
RHH5296_R3662
30.6
Vd2 gdTCR nTPM: 49.7
Samples: 4
Max nTPM: 75.7
Min nTPM: 28.2
RHH5234_R3606
36.7
RHH5206_R3577
75.7
RHH5263_R3635
28.2
RHH5298_R3664
58.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
