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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
148.9
nTPM
Monaco:
47.5
nTPM
Schmiedel:
104.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
148.9
HPA sample
nTPM
gdT-cell nTPM: 131.3
Samples: 6
Max nTPM: 165.2
Min nTPM: 112.2
P10809_1007
129.1
P10809_1022
128.2
P10809_1041
165.2
P10809_1060
112.2
P10809_1077
130.6
P10809_1098
122.3
MAIT T-cell nTPM: 117.8
Samples: 6
Max nTPM: 152.7
Min nTPM: 96.5
P10809_1006
96.5
P10809_1024
109.0
P10809_1043
116.1
P10809_1062
118.1
P10809_1083
114.2
P10809_1097
152.7
Memory CD4 T-cell nTPM: 116.7
Samples: 6
Max nTPM: 141.7
Min nTPM: 93.9
P10809_1014
114.0
P10809_1026
141.7
P10809_1045
107.4
P10809_1064
136.5
P10809_1086
106.4
P10809_1113
93.9
Memory CD8 T-cell nTPM: 136.6
Samples: 5
Max nTPM: 151.3
Min nTPM: 120.6
P10809_1012
130.5
P10809_1027
120.6
P10809_1046
151.3
P10809_1065
142.2
P10809_1111
138.5
Naive CD4 T-cell nTPM: 115.0
Samples: 6
Max nTPM: 141.5
Min nTPM: 86.3
P10809_1015
86.3
P10809_1030
124.6
P10809_1049
141.3
P10809_1068
103.6
P10809_1085
141.5
P10809_1112
92.6
Naive CD8 T-cell nTPM: 123.7
Samples: 6
Max nTPM: 143.0
Min nTPM: 110.3
P10809_1016
110.3
P10809_1031
135.8
P10809_1050
129.5
P10809_1069
143.0
P10809_1087
112.1
P10809_1110
111.7
T-reg nTPM: 149.0
Samples: 6
Max nTPM: 214.3
Min nTPM: 127.4
P10809_1018
133.9
P10809_1037
130.2
P10809_1056
214.3
P10809_1075
148.1
P10809_1094
127.4
P10809_1106
139.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 33.1
Min nTPM: 22.8
RHH5202_R3573
22.8
RHH5230_R3602
25.4
RHH5259_R3631
33.1
RHH5288_R3660
30.0
Effector memory CD8 T-cell nTPM: 27.4
Samples: 4
Max nTPM: 31.5
Min nTPM: 19.1
RHH5203_R3574
31.5
RHH5231_R3603
27.8
RHH5260_R3632
31.3
RHH5289_R3661
19.1
MAIT T-cell nTPM: 29.1
Samples: 4
Max nTPM: 35.4
Min nTPM: 23.4
RHH5233_R3605
24.0
RHH5205_R3576
23.4
RHH5262_R3634
33.7
RHH5297_R3663
35.4
Memory CD4 T-cell TFH nTPM: 27.3
Samples: 4
Max nTPM: 47.9
Min nTPM: 14.4
RHH5300_R3666
20.1
RHH5236_R3608
47.9
RHH5265_R3637
14.4
RHH5208_R3579
26.6
Memory CD4 T-cell Th1 nTPM: 30.3
Samples: 4
Max nTPM: 39.0
Min nTPM: 20.5
RHH5210_R3581
27.5
RHH5302_R3668
39.0
RHH5238_R3610
34.0
RHH5267_R3639
20.5
Memory CD4 T-cell Th1/Th17 nTPM: 27.8
Samples: 4
Max nTPM: 32.5
Min nTPM: 20.0
RHH5303_R3669
31.9
RHH5211_R3582
32.5
RHH5239_R3611
20.0
RHH5268_R3640
26.6
Memory CD4 T-cell Th17 nTPM: 23.5
Samples: 4
Max nTPM: 37.7
Min nTPM: 15.2
RHH5304_R3670
25.7
RHH5212_R3583
37.7
RHH5240_R3612
15.3
RHH5269_R3641
15.2
Memory CD4 T-cell Th2 nTPM: 17.8
Samples: 4
Max nTPM: 18.9
Min nTPM: 16.5
RHH5305_R3671
18.4
RHH5213_R3584
18.9
RHH5241_R3613
16.5
RHH5270_R3642
17.3
Naive CD4 T-cell nTPM: 25.9
Samples: 4
Max nTPM: 41.8
Min nTPM: 16.7
RHH5306_R3672
27.0
RHH5214_R3585
41.8
RHH5242_R3614
18.1
RHH5271_R3643
16.7
Naive CD8 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 32.8
Min nTPM: 17.3
RHH5201_R3572
17.3
RHH5229_R3601
24.0
RHH5258_R3630
32.8
RHH5287_R3659
32.0
Non-Vd2 gdTCR nTPM: 32.1
Samples: 4
Max nTPM: 48.9
Min nTPM: 20.7
RHH5235_R3607
29.6
RHH5264_R3636
29.3
RHH5207_R3578
20.7
RHH5299_R3665
48.9
T-reg nTPM: 29.2
Samples: 4
Max nTPM: 33.7
Min nTPM: 24.1
RHH5301_R3667
28.3
RHH5237_R3609
33.7
RHH5266_R3638
24.1
RHH5209_R3580
30.6
Terminal effector memory CD4 T-cell nTPM: 27.0
Samples: 2
Max nTPM: 28.6
Min nTPM: 25.3
RHH5243_R3615
25.3
RHH5272_R3644
28.6
Terminal effector memory CD8 T-cell nTPM: 47.5
Samples: 4
Max nTPM: 100.3
Min nTPM: 28.0
RHH5232_R3604
33.0
RHH5204_R3575
100.3
RHH5261_R3633
28.7
RHH5296_R3662
28.0
Vd2 gdTCR nTPM: 44.3
Samples: 4
Max nTPM: 62.8
Min nTPM: 29.0
RHH5234_R3606
31.8
RHH5206_R3577
62.8
RHH5263_R3635
29.0
RHH5298_R3664
53.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
