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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.7
nTPM
Monaco:
225.6
nTPM
Schmiedel:
72.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.7
HPA sample
nTPM
gdT-cell nTPM: 85.5
Samples: 6
Max nTPM: 102.1
Min nTPM: 60.2
P10809_1007
60.2
P10809_1022
100.6
P10809_1041
102.1
P10809_1060
84.5
P10809_1077
78.6
P10809_1098
87.2
MAIT T-cell nTPM: 77.5
Samples: 6
Max nTPM: 101.3
Min nTPM: 54.0
P10809_1006
63.1
P10809_1024
101.3
P10809_1043
87.7
P10809_1062
70.7
P10809_1083
54.0
P10809_1097
88.3
Memory CD4 T-cell nTPM: 71.7
Samples: 6
Max nTPM: 91.8
Min nTPM: 49.8
P10809_1014
49.8
P10809_1026
87.2
P10809_1045
91.8
P10809_1064
70.1
P10809_1086
54.0
P10809_1113
77.0
Memory CD8 T-cell nTPM: 76.8
Samples: 5
Max nTPM: 86.4
Min nTPM: 73.3
P10809_1012
74.8
P10809_1027
75.1
P10809_1046
86.4
P10809_1065
73.3
P10809_1111
74.5
Naive CD4 T-cell nTPM: 53.0
Samples: 6
Max nTPM: 65.1
Min nTPM: 40.2
P10809_1015
40.2
P10809_1030
49.9
P10809_1049
65.1
P10809_1068
60.7
P10809_1085
45.4
P10809_1112
56.7
Naive CD8 T-cell nTPM: 62.7
Samples: 6
Max nTPM: 83.5
Min nTPM: 44.9
P10809_1016
44.9
P10809_1031
56.8
P10809_1050
62.7
P10809_1069
83.5
P10809_1087
70.9
P10809_1110
57.3
T-reg nTPM: 87.7
Samples: 6
Max nTPM: 133.7
Min nTPM: 62.0
P10809_1018
88.9
P10809_1037
63.1
P10809_1056
133.7
P10809_1075
62.0
P10809_1094
88.6
P10809_1106
89.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 149.6
Samples: 4
Max nTPM: 166.1
Min nTPM: 129.7
RHH5202_R3573
129.7
RHH5230_R3602
144.7
RHH5259_R3631
166.1
RHH5288_R3660
157.7
Effector memory CD8 T-cell nTPM: 201.1
Samples: 4
Max nTPM: 225.9
Min nTPM: 178.8
RHH5203_R3574
186.0
RHH5231_R3603
178.8
RHH5260_R3632
213.6
RHH5289_R3661
225.9
MAIT T-cell nTPM: 183.0
Samples: 4
Max nTPM: 207.8
Min nTPM: 159.5
RHH5233_R3605
194.4
RHH5205_R3576
207.8
RHH5262_R3634
170.3
RHH5297_R3663
159.5
Memory CD4 T-cell TFH nTPM: 127.4
Samples: 4
Max nTPM: 149.3
Min nTPM: 97.7
RHH5300_R3666
118.6
RHH5236_R3608
149.3
RHH5265_R3637
143.9
RHH5208_R3579
97.7
Memory CD4 T-cell Th1 nTPM: 137.6
Samples: 4
Max nTPM: 161.6
Min nTPM: 109.3
RHH5210_R3581
109.3
RHH5302_R3668
134.2
RHH5238_R3610
145.1
RHH5267_R3639
161.6
Memory CD4 T-cell Th1/Th17 nTPM: 162.1
Samples: 4
Max nTPM: 176.4
Min nTPM: 135.8
RHH5303_R3669
168.6
RHH5211_R3582
135.8
RHH5239_R3611
176.4
RHH5268_R3640
167.4
Memory CD4 T-cell Th17 nTPM: 184.9
Samples: 4
Max nTPM: 204.9
Min nTPM: 158.9
RHH5304_R3670
186.3
RHH5212_R3583
158.9
RHH5240_R3612
204.9
RHH5269_R3641
189.3
Memory CD4 T-cell Th2 nTPM: 156.6
Samples: 4
Max nTPM: 171.9
Min nTPM: 139.7
RHH5305_R3671
139.7
RHH5213_R3584
171.9
RHH5241_R3613
147.4
RHH5270_R3642
167.5
Naive CD4 T-cell nTPM: 117.6
Samples: 4
Max nTPM: 139.1
Min nTPM: 101.8
RHH5306_R3672
101.8
RHH5214_R3585
113.3
RHH5242_R3614
116.3
RHH5271_R3643
139.1
Naive CD8 T-cell nTPM: 115.8
Samples: 4
Max nTPM: 138.6
Min nTPM: 102.4
RHH5201_R3572
107.1
RHH5229_R3601
138.6
RHH5258_R3630
102.4
RHH5287_R3659
115.2
Non-Vd2 gdTCR nTPM: 212.2
Samples: 4
Max nTPM: 239.8
Min nTPM: 188.4
RHH5235_R3607
239.8
RHH5264_R3636
224.3
RHH5207_R3578
196.2
RHH5299_R3665
188.4
T-reg nTPM: 144.8
Samples: 4
Max nTPM: 158.3
Min nTPM: 130.6
RHH5301_R3667
130.6
RHH5237_R3609
158.3
RHH5266_R3638
152.8
RHH5209_R3580
137.6
Terminal effector memory CD4 T-cell nTPM: 200.1
Samples: 2
Max nTPM: 213.2
Min nTPM: 186.9
RHH5243_R3615
213.2
RHH5272_R3644
186.9
Terminal effector memory CD8 T-cell nTPM: 225.6
Samples: 4
Max nTPM: 264.3
Min nTPM: 165.7
RHH5232_R3604
253.5
RHH5204_R3575
165.7
RHH5261_R3633
264.3
RHH5296_R3662
218.8
Vd2 gdTCR nTPM: 174.8
Samples: 4
Max nTPM: 217.5
Min nTPM: 132.2
RHH5234_R3606
166.0
RHH5206_R3577
183.3
RHH5263_R3635
217.5
RHH5298_R3664
132.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
