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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.6
nTPM
Monaco:
13.6
nTPM
Schmiedel:
10.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.6
HPA sample
nTPM
gdT-cell nTPM: 109.9
Samples: 6
Max nTPM: 123.4
Min nTPM: 81.7
P10809_1007
81.7
P10809_1022
122.4
P10809_1041
116.2
P10809_1060
123.4
P10809_1077
103.0
P10809_1098
112.8
MAIT T-cell nTPM: 125.5
Samples: 6
Max nTPM: 158.4
Min nTPM: 88.3
P10809_1006
88.3
P10809_1024
152.1
P10809_1043
106.3
P10809_1062
111.9
P10809_1083
135.9
P10809_1097
158.4
Memory CD4 T-cell nTPM: 124.0
Samples: 6
Max nTPM: 197.8
Min nTPM: 77.6
P10809_1014
77.6
P10809_1026
197.8
P10809_1045
97.3
P10809_1064
115.6
P10809_1086
113.8
P10809_1113
142.0
Memory CD8 T-cell nTPM: 118.7
Samples: 5
Max nTPM: 154.4
Min nTPM: 85.3
P10809_1012
85.3
P10809_1027
124.2
P10809_1046
90.4
P10809_1065
139.4
P10809_1111
154.4
Naive CD4 T-cell nTPM: 129.5
Samples: 6
Max nTPM: 195.8
Min nTPM: 76.6
P10809_1015
76.6
P10809_1030
195.8
P10809_1049
110.5
P10809_1068
149.6
P10809_1085
115.3
P10809_1112
129.2
Naive CD8 T-cell nTPM: 129.6
Samples: 6
Max nTPM: 158.6
Min nTPM: 93.3
P10809_1016
101.9
P10809_1031
158.6
P10809_1050
93.3
P10809_1069
150.1
P10809_1087
132.5
P10809_1110
140.9
T-reg nTPM: 119.4
Samples: 6
Max nTPM: 160.8
Min nTPM: 88.1
P10809_1018
88.1
P10809_1037
111.9
P10809_1056
147.2
P10809_1075
95.5
P10809_1094
160.8
P10809_1106
112.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.6
Samples: 4
Max nTPM: 16.8
Min nTPM: 6.9
RHH5202_R3573
7.3
RHH5230_R3602
16.8
RHH5259_R3631
11.5
RHH5288_R3660
6.9
Effector memory CD8 T-cell nTPM: 7.4
Samples: 4
Max nTPM: 19.2
Min nTPM: 2.2
RHH5203_R3574
2.2
RHH5231_R3603
3.0
RHH5260_R3632
19.2
RHH5289_R3661
5.2
MAIT T-cell nTPM: 8.7
Samples: 4
Max nTPM: 11.0
Min nTPM: 7.3
RHH5233_R3605
8.1
RHH5205_R3576
7.3
RHH5262_R3634
11.0
RHH5297_R3663
8.5
Memory CD4 T-cell TFH nTPM: 2.7
Samples: 4
Max nTPM: 5.1
Min nTPM: 1.0
RHH5300_R3666
1.0
RHH5236_R3608
2.0
RHH5265_R3637
2.8
RHH5208_R3579
5.1
Memory CD4 T-cell Th1 nTPM: 10.7
Samples: 4
Max nTPM: 21.0
Min nTPM: 3.3
RHH5210_R3581
3.3
RHH5302_R3668
7.3
RHH5238_R3610
21.0
RHH5267_R3639
11.0
Memory CD4 T-cell Th1/Th17 nTPM: 10.4
Samples: 4
Max nTPM: 16.4
Min nTPM: 6.3
RHH5303_R3669
6.3
RHH5211_R3582
6.3
RHH5239_R3611
16.4
RHH5268_R3640
12.5
Memory CD4 T-cell Th17 nTPM: 8.5
Samples: 4
Max nTPM: 9.9
Min nTPM: 6.3
RHH5304_R3670
6.3
RHH5212_R3583
8.4
RHH5240_R3612
9.4
RHH5269_R3641
9.9
Memory CD4 T-cell Th2 nTPM: 5.1
Samples: 4
Max nTPM: 8.5
Min nTPM: 0.2
RHH5305_R3671
8.5
RHH5213_R3584
0.2
RHH5241_R3613
8.0
RHH5270_R3642
3.6
Naive CD4 T-cell nTPM: 12.3
Samples: 4
Max nTPM: 22.6
Min nTPM: 8.4
RHH5306_R3672
8.6
RHH5214_R3585
9.5
RHH5242_R3614
8.4
RHH5271_R3643
22.6
Naive CD8 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 13.9
Min nTPM: 3.8
RHH5201_R3572
13.9
RHH5229_R3601
12.6
RHH5258_R3630
3.8
RHH5287_R3659
7.9
Non-Vd2 gdTCR nTPM: 8.0
Samples: 4
Max nTPM: 9.5
Min nTPM: 5.0
RHH5235_R3607
9.5
RHH5264_R3636
5.0
RHH5207_R3578
9.1
RHH5299_R3665
8.2
T-reg nTPM: 6.9
Samples: 4
Max nTPM: 10.6
Min nTPM: 4.9
RHH5301_R3667
5.6
RHH5237_R3609
4.9
RHH5266_R3638
10.6
RHH5209_R3580
6.3
Terminal effector memory CD4 T-cell nTPM: 13.6
Samples: 2
Max nTPM: 21.5
Min nTPM: 5.7
RHH5243_R3615
21.5
RHH5272_R3644
5.7
Terminal effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 10.3
Min nTPM: 4.0
RHH5232_R3604
7.6
RHH5204_R3575
10.3
RHH5261_R3633
8.4
RHH5296_R3662
4.0
Vd2 gdTCR nTPM: 9.7
Samples: 4
Max nTPM: 16.2
Min nTPM: 2.9
RHH5234_R3606
2.9
RHH5206_R3577
16.2
RHH5263_R3635
12.1
RHH5298_R3664
7.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
