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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
252.7
nTPM
Monaco:
82.4
nTPM
Schmiedel:
26.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
252.7
HPA sample
nTPM
gdT-cell nTPM: 202.6
Samples: 6
Max nTPM: 247.0
Min nTPM: 134.4
P10809_1007
134.4
P10809_1022
180.3
P10809_1041
233.5
P10809_1060
192.9
P10809_1077
227.2
P10809_1098
247.0
MAIT T-cell nTPM: 252.7
Samples: 6
Max nTPM: 312.1
Min nTPM: 143.3
P10809_1006
143.3
P10809_1024
290.1
P10809_1043
276.9
P10809_1062
252.0
P10809_1083
241.7
P10809_1097
312.1
Memory CD4 T-cell nTPM: 247.5
Samples: 6
Max nTPM: 300.2
Min nTPM: 162.5
P10809_1014
162.5
P10809_1026
247.7
P10809_1045
211.8
P10809_1064
300.2
P10809_1086
293.8
P10809_1113
269.2
Memory CD8 T-cell nTPM: 227.8
Samples: 5
Max nTPM: 275.0
Min nTPM: 138.6
P10809_1012
138.6
P10809_1027
225.1
P10809_1046
238.7
P10809_1065
275.0
P10809_1111
261.6
Naive CD4 T-cell nTPM: 252.7
Samples: 6
Max nTPM: 297.7
Min nTPM: 162.1
P10809_1015
162.1
P10809_1030
263.5
P10809_1049
297.7
P10809_1068
258.3
P10809_1085
288.0
P10809_1112
246.6
Naive CD8 T-cell nTPM: 233.5
Samples: 6
Max nTPM: 273.4
Min nTPM: 163.0
P10809_1016
163.0
P10809_1031
238.4
P10809_1050
225.6
P10809_1069
273.4
P10809_1087
263.3
P10809_1110
237.5
T-reg nTPM: 221.9
Samples: 6
Max nTPM: 261.7
Min nTPM: 140.2
P10809_1018
140.2
P10809_1037
245.1
P10809_1056
247.7
P10809_1075
233.4
P10809_1094
203.3
P10809_1106
261.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.3
Samples: 4
Max nTPM: 70.4
Min nTPM: 39.7
RHH5202_R3573
39.7
RHH5230_R3602
55.7
RHH5259_R3631
59.5
RHH5288_R3660
70.4
Effector memory CD8 T-cell nTPM: 40.7
Samples: 4
Max nTPM: 53.1
Min nTPM: 28.3
RHH5203_R3574
43.2
RHH5231_R3603
38.0
RHH5260_R3632
53.1
RHH5289_R3661
28.3
MAIT T-cell nTPM: 57.6
Samples: 4
Max nTPM: 83.8
Min nTPM: 44.4
RHH5233_R3605
44.4
RHH5205_R3576
54.0
RHH5262_R3634
48.2
RHH5297_R3663
83.8
Memory CD4 T-cell TFH nTPM: 52.6
Samples: 4
Max nTPM: 87.6
Min nTPM: 34.6
RHH5300_R3666
48.1
RHH5236_R3608
87.6
RHH5265_R3637
34.6
RHH5208_R3579
40.2
Memory CD4 T-cell Th1 nTPM: 58.5
Samples: 4
Max nTPM: 78.9
Min nTPM: 22.9
RHH5210_R3581
22.9
RHH5302_R3668
78.9
RHH5238_R3610
74.0
RHH5267_R3639
58.3
Memory CD4 T-cell Th1/Th17 nTPM: 61.7
Samples: 4
Max nTPM: 71.9
Min nTPM: 40.7
RHH5303_R3669
71.9
RHH5211_R3582
62.7
RHH5239_R3611
40.7
RHH5268_R3640
71.4
Memory CD4 T-cell Th17 nTPM: 50.7
Samples: 4
Max nTPM: 64.3
Min nTPM: 39.3
RHH5304_R3670
64.3
RHH5212_R3583
50.9
RHH5240_R3612
39.3
RHH5269_R3641
48.2
Memory CD4 T-cell Th2 nTPM: 48.0
Samples: 4
Max nTPM: 66.5
Min nTPM: 37.5
RHH5305_R3671
66.5
RHH5213_R3584
49.2
RHH5241_R3613
37.5
RHH5270_R3642
38.9
Naive CD4 T-cell nTPM: 46.4
Samples: 4
Max nTPM: 60.9
Min nTPM: 38.2
RHH5306_R3672
43.7
RHH5214_R3585
60.9
RHH5242_R3614
42.8
RHH5271_R3643
38.2
Naive CD8 T-cell nTPM: 43.5
Samples: 4
Max nTPM: 54.5
Min nTPM: 32.1
RHH5201_R3572
38.6
RHH5229_R3601
48.7
RHH5258_R3630
32.1
RHH5287_R3659
54.5
Non-Vd2 gdTCR nTPM: 62.3
Samples: 4
Max nTPM: 69.2
Min nTPM: 56.0
RHH5235_R3607
65.1
RHH5264_R3636
56.0
RHH5207_R3578
58.7
RHH5299_R3665
69.2
T-reg nTPM: 46.5
Samples: 4
Max nTPM: 53.5
Min nTPM: 37.0
RHH5301_R3667
53.5
RHH5237_R3609
50.8
RHH5266_R3638
44.6
RHH5209_R3580
37.0
Terminal effector memory CD4 T-cell nTPM: 53.9
Samples: 2
Max nTPM: 65.6
Min nTPM: 42.1
RHH5243_R3615
42.1
RHH5272_R3644
65.6
Terminal effector memory CD8 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 100.5
Min nTPM: 48.3
RHH5232_R3604
48.3
RHH5204_R3575
100.5
RHH5261_R3633
62.9
RHH5296_R3662
59.9
Vd2 gdTCR nTPM: 82.4
Samples: 4
Max nTPM: 141.0
Min nTPM: 50.6
RHH5234_R3606
50.6
RHH5206_R3577
141.0
RHH5263_R3635
51.5
RHH5298_R3664
86.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
