HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:15.1 nTPM
GTEx:27.6 nTPM
FANTOM5:28.9 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:381.5 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052032
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
2529 Female, age 94, left hemisphere 15.7
1855 Male, age 76, left hemisphere 15.2
1898 Male, age 80, left hemisphere 14.3
2148 Female, age 91, left hemisphere 14.0
1911 Female, age 85, right hemisphere 13.0
2621 Female, age 67, right hemisphere 11.8
Dentate gyrus
nTPM: 13.5
2010 Male, age 76, both hemispheres 15.6
2246 Female, age 85, both hemispheres 15.0
2531 Female, age 67, both hemispheres 13.5
2528 Male, age 74, both hemispheres 12.3
2530 Female, age 94, left hemisphere 12.3
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 13.6
2117 Female, age 91, right hemisphere 14.4
1787 Male, age 76, left hemisphere 14.2
1938 Female, age 85, left hemisphere 14.0
2686 Male, age 75, right hemisphere 13.7
2764 Male, age 80, right hemisphere 13.3
2613 Female, age 94, left hemisphere 11.9
Hippocampus, CA1
nTPM: 14.6
2082 Female, age 91, right hemisphere 16.7
2527 Male, age 74, both hemispheres 15.9
2045 Male, age 76, both hemispheres 14.6
1873 Female, age 85, both hemispheres 13.2
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 15.1
2249 Male, age 74, both hemispheres 20.0
1963 Male, age 80, left hemisphere 15.1
1892 Male, age 76, both hemispheres 14.4
2113 Female, age 91, right hemisphere 14.2
1940 Female, age 85, left hemisphere 13.9
2437 Female, age 94, left hemisphere 13.2
Hippocampus, CA3
nTPM: 14.1
2436 Male, age 74, both hemispheres 16.4
1891 Female, age 85, both hemispheres 15.9
1867 Male, age 76, both hemispheres 14.0
2620 Female, age 94, left hemisphere 13.8
2137 Male, age 80, left hemisphere 13.2
2861 Female, age 67, both hemispheres 11.0
Parahippocampal cortex
nTPM: 13.5
2692 Male, age 74, both hemispheres 17.9
2018 Male, age 76, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.6
2250 Female, age 67, right hemisphere 14.0
2532 Female, age 72, left hemisphere 13.1
1933 Female, age 85, both hemispheres 12.8
2245 Female, age 91, both hemispheres 12.8
2693 Female, age 94, both hemispheres 11.9
1850 Male, age 80, both hemispheres 11.8
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 11.5
2521 Female, age 94, right hemisphere 13.2
1847 Female, age 91, left hemisphere 11.7
1841 Female, age 85, right hemisphere 11.1
2848 Male, age 76, right hemisphere 10.7
1794 Male, age 80, right hemisphere 10.5
Subiculum
nTPM: 14.9
2042 Male, age 76, both hemispheres 16.8
1901 Male, age 80, both hemispheres 16.2
1977 Female, age 85, both hemispheres 15.8
2619 Male, age 74, both hemispheres 15.1
2729 Female, age 91, right hemisphere 14.7
2438 Female, age 94, left hemisphere 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 49.0
Min nTPM: 15.5
Std nTPM: 6.1
Median nTPM: 26.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 45.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 44.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 43.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 41.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 41.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 41.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.9
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Subiculum
nTPM: 20.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 18.3
Sample A Female 27.3
Sample B Female 19.5
Sample C Male 18.3
Sample D Male 18.4
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 32.0
Min nTPM: 21.5
Sample A Female 32.0
Sample B Female 22.8
Sample C Male 21.6
Sample D Male 21.5
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 18.7
Sample A Female 21.9
Sample B Female 22.3
Sample C Male 21.1
Sample D Male 18.7
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.6
Min nTPM: 18.5
Sample A Female 21.2
Sample B Female 18.5
Sample C Male 27.6
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 381.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 359.5
Samples: 4

Max nTPM: 383.1
Min nTPM: 335.1
Sample A Male 335.1
Sample B Male 359.6
Sample C Female 383.1
Sample D Female 360.1
Hippocampal formation
nTPM: 381.5
Samples: 4

Max nTPM: 430.5
Min nTPM: 353.7
Sample A Male 430.5
Sample B Male 353.7
Sample C Female 372.0
Sample D Female 369.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
68546452 Antisense, RP_050120_02_E06, Mouse strain C57BL/6J (56 days, male) 17.5
81599676 Antisense, RP_080103_01_B12, Mouse strain C57BL/6J (56 days, male) 14.2

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