HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:57.0 nTPM
HPA Brain:36.6 nTPM
GTEx:57.0 nTPM
FANTOM5:114.7 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:18.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
2529 Female, age 94, left hemisphere 44.3
2621 Female, age 67, right hemisphere 41.2
1855 Male, age 76, left hemisphere 39.2
2148 Female, age 91, left hemisphere 34.6
1911 Female, age 85, right hemisphere 30.5
1898 Male, age 80, left hemisphere 30.1
Dentate gyrus
nTPM: 32.8
2010 Male, age 76, both hemispheres 49.1
2530 Female, age 94, left hemisphere 37.5
2246 Female, age 85, both hemispheres 33.1
2531 Female, age 67, both hemispheres 31.5
2528 Male, age 74, both hemispheres 27.2
1927 Female, age 91, both hemispheres 18.4
Entorhinal gyrus
nTPM: 21.9
2117 Female, age 91, right hemisphere 28.3
1787 Male, age 76, left hemisphere 28.0
2764 Male, age 80, right hemisphere 21.4
1938 Female, age 85, left hemisphere 18.9
2686 Male, age 75, right hemisphere 18.9
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 32.6
2527 Male, age 74, both hemispheres 42.9
2045 Male, age 76, both hemispheres 38.6
2082 Female, age 91, right hemisphere 33.1
1873 Female, age 85, both hemispheres 32.5
2749 Male, age 80, left hemisphere 16.1
Hippocampus, CA2
nTPM: 26.9
2249 Male, age 74, both hemispheres 35.3
2113 Female, age 91, right hemisphere 29.5
1940 Female, age 85, left hemisphere 29.2
2437 Female, age 94, left hemisphere 29.1
1963 Male, age 80, left hemisphere 20.0
1892 Male, age 76, both hemispheres 18.3
Hippocampus, CA3
nTPM: 28.2
2620 Female, age 94, left hemisphere 35.4
2861 Female, age 67, both hemispheres 33.4
2436 Male, age 74, both hemispheres 28.4
1867 Male, age 76, both hemispheres 26.5
1891 Female, age 85, both hemispheres 23.8
2137 Male, age 80, left hemisphere 21.6
Parahippocampal cortex
nTPM: 24.7
2018 Male, age 76, both hemispheres 41.9
2245 Female, age 91, both hemispheres 32.6
2250 Female, age 67, right hemisphere 28.4
2692 Male, age 74, both hemispheres 27.1
2622 Female, age 67, right hemisphere 23.4
1933 Female, age 85, both hemispheres 22.1
2532 Female, age 72, left hemisphere 21.2
1850 Male, age 80, both hemispheres 18.8
1990 Female, age 91, right hemisphere 18.2
2693 Female, age 94, both hemispheres 13.6
Perirhinal gyrus
nTPM: 17.7
2521 Female, age 94, right hemisphere 20.3
2848 Male, age 76, right hemisphere 19.6
1847 Female, age 91, left hemisphere 17.3
1794 Male, age 80, right hemisphere 15.8
1841 Female, age 85, right hemisphere 15.5
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 41.5
2438 Female, age 94, left hemisphere 39.4
2619 Male, age 74, both hemispheres 31.8
2729 Female, age 91, right hemisphere 31.1
1901 Male, age 80, both hemispheres 25.7
1977 Female, age 85, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.0
Samples: 197

Max nTPM: 291.3
Min nTPM: 14.3
Std nTPM: 35.4
Median nTPM: 48.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 291.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 238.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 237.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 143.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 124.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 123.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 121.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 119.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 118.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 113.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 112.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.7
FF:10153-102I9 76 years, female 139.2
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 14.9
Min nTPM: 4.8
Sample A Female 14.9
Sample B Female 4.8
Sample C Male 10.3
Sample D Male 9.9
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 17.3
Min nTPM: 3.1
Sample A Female 11.3
Sample B Female 5.2
Sample C Male 17.3
Sample D Male 3.1
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.0
Sample A Female 9.9
Sample B Female 8.6
Sample C Male 7.0
Sample D Male 7.0
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 3.0
Sample A Female 19.2
Sample B Female 3.0
Sample C Male 15.1
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.5
Sample A Male 17.5
Sample B Male 19.0
Sample C Female 18.1
Sample D Female 17.5
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 5.3
Sample A Male 10.7
Sample B Male 5.3
Sample C Female 6.0
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
631712 Antisense, RP_040907_01_B01, Mouse strain C57BL/6J (56 days, male) 0.0

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