HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.5 nTPM
HPA Brain:27.4 nTPM
GTEx:22.5 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:56.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.4
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
2148 Female, age 91, left hemisphere 29.7
2529 Female, age 94, left hemisphere 28.4
1898 Male, age 80, left hemisphere 27.9
1855 Male, age 76, left hemisphere 27.2
2621 Female, age 67, right hemisphere 26.7
1911 Female, age 85, right hemisphere 24.4
Dentate gyrus
nTPM: 24.7
2530 Female, age 94, left hemisphere 28.2
2528 Male, age 74, both hemispheres 26.4
2531 Female, age 67, both hemispheres 24.7
2010 Male, age 76, both hemispheres 24.1
1927 Female, age 91, both hemispheres 22.9
2246 Female, age 85, both hemispheres 21.9
Entorhinal gyrus
nTPM: 25.7
2117 Female, age 91, right hemisphere 32.5
2686 Male, age 75, right hemisphere 29.1
2764 Male, age 80, right hemisphere 27.0
1787 Male, age 76, left hemisphere 23.0
2613 Female, age 94, left hemisphere 21.5
1938 Female, age 85, left hemisphere 20.8
Hippocampus, CA1
nTPM: 23.4
2749 Male, age 80, left hemisphere 24.8
2082 Female, age 91, right hemisphere 24.4
2527 Male, age 74, both hemispheres 24.4
2045 Male, age 76, both hemispheres 22.3
1873 Female, age 85, both hemispheres 20.9
Hippocampus, CA2
nTPM: 25.0
1963 Male, age 80, left hemisphere 28.0
1892 Male, age 76, both hemispheres 25.9
2437 Female, age 94, left hemisphere 25.4
2113 Female, age 91, right hemisphere 24.8
1940 Female, age 85, left hemisphere 24.2
2249 Male, age 74, both hemispheres 21.8
Hippocampus, CA3
nTPM: 26.7
2861 Female, age 67, both hemispheres 34.1
1891 Female, age 85, both hemispheres 27.4
1867 Male, age 76, both hemispheres 26.6
2137 Male, age 80, left hemisphere 24.4
2436 Male, age 74, both hemispheres 24.2
2620 Female, age 94, left hemisphere 23.4
Parahippocampal cortex
nTPM: 23.3
2692 Male, age 74, both hemispheres 27.9
2622 Female, age 67, right hemisphere 26.3
1990 Female, age 91, right hemisphere 24.1
2245 Female, age 91, both hemispheres 24.1
2532 Female, age 72, left hemisphere 22.8
2018 Male, age 76, both hemispheres 22.7
1850 Male, age 80, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.8
1933 Female, age 85, both hemispheres 20.3
2693 Female, age 94, both hemispheres 20.3
Perirhinal gyrus
nTPM: 20.6
1794 Male, age 80, right hemisphere 22.2
2521 Female, age 94, right hemisphere 21.7
1847 Female, age 91, left hemisphere 21.5
1841 Female, age 85, right hemisphere 20.1
2848 Male, age 76, right hemisphere 17.4
Subiculum
nTPM: 25.0
2619 Male, age 74, both hemispheres 26.8
2042 Male, age 76, both hemispheres 26.5
2729 Female, age 91, right hemisphere 26.3
1901 Male, age 80, both hemispheres 25.7
1977 Female, age 85, both hemispheres 22.5
2438 Female, age 94, left hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 44.9
Min nTPM: 13.4
Std nTPM: 4.5
Median nTPM: 22.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 44.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 35.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 33.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 33.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 31.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 31.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 29.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.4
FF:10153-102I9 76 years, female 18.3
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.3
Sample A Female 12.8
Sample B Female 9.5
Sample C Male 10.4
Sample D Male 9.3
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.1
Sample A Female 12.4
Sample B Female 11.2
Sample C Male 11.3
Sample D Male 8.1
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 10.9
Sample A Female 11.6
Sample B Female 11.0
Sample C Male 13.0
Sample D Male 10.9
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 14.3
Min nTPM: 8.6
Sample A Female 10.8
Sample B Female 8.6
Sample C Male 14.3
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 48.6
Min nTPM: 38.4
Sample A Male 38.4
Sample B Male 48.6
Sample C Female 46.6
Sample D Female 38.4
Hippocampal formation
nTPM: 56.0
Samples: 4

Max nTPM: 67.6
Min nTPM: 42.4
Sample A Male 67.6
Sample B Male 42.4
Sample C Female 61.2
Sample D Female 52.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
112647750 Antisense, RP_110421_01_A09, Mouse strain C57BL/6J (56 days, male) 0.6
100144164 Antisense, RP_110421_01_A09, Mouse strain C57BL/6J (56 days, male) 0.4

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