HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:30.2 nTPM
HPA Brain:71.3 nTPM
GTEx:30.2 nTPM
FANTOM5:59.1 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:116.9 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040825
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.3
Sample id Sample description nTPM
Hippocampus
nTPM: 58.5
1898 Male, age 80, left hemisphere 64.8
2621 Female, age 67, right hemisphere 62.2
2148 Female, age 91, left hemisphere 61.7
1855 Male, age 76, left hemisphere 61.1
1911 Female, age 85, right hemisphere 50.7
2529 Female, age 94, left hemisphere 50.3
Dentate gyrus
nTPM: 59.6
1927 Female, age 91, both hemispheres 69.2
2531 Female, age 67, both hemispheres 65.6
2530 Female, age 94, left hemisphere 59.3
2528 Male, age 74, both hemispheres 55.3
2010 Male, age 76, both hemispheres 54.6
2246 Female, age 85, both hemispheres 53.6
Entorhinal gyrus
nTPM: 61.9
2764 Male, age 80, right hemisphere 71.2
2613 Female, age 94, left hemisphere 66.8
1938 Female, age 85, left hemisphere 64.7
1787 Male, age 76, left hemisphere 62.7
2686 Male, age 75, right hemisphere 56.2
2117 Female, age 91, right hemisphere 49.7
Hippocampus, CA1
nTPM: 61.2
2749 Male, age 80, left hemisphere 79.8
2045 Male, age 76, both hemispheres 64.0
2082 Female, age 91, right hemisphere 56.3
1873 Female, age 85, both hemispheres 53.7
2527 Male, age 74, both hemispheres 52.1
Hippocampus, CA2
nTPM: 57.5
1892 Male, age 76, both hemispheres 64.1
2437 Female, age 94, left hemisphere 62.4
1963 Male, age 80, left hemisphere 61.2
1940 Female, age 85, left hemisphere 54.4
2113 Female, age 91, right hemisphere 53.0
2249 Male, age 74, both hemispheres 50.1
Hippocampus, CA3
nTPM: 63.3
2861 Female, age 67, both hemispheres 82.9
2620 Female, age 94, left hemisphere 76.2
2137 Male, age 80, left hemisphere 69.8
1867 Male, age 76, both hemispheres 52.2
2436 Male, age 74, both hemispheres 51.1
1891 Female, age 85, both hemispheres 47.8
Parahippocampal cortex
nTPM: 60.2
1850 Male, age 80, both hemispheres 68.0
1933 Female, age 85, both hemispheres 66.4
2245 Female, age 91, both hemispheres 64.1
1990 Female, age 91, right hemisphere 62.4
2622 Female, age 67, right hemisphere 61.4
2693 Female, age 94, both hemispheres 60.0
2532 Female, age 72, left hemisphere 59.7
2018 Male, age 76, both hemispheres 55.6
2692 Male, age 74, both hemispheres 52.8
2250 Female, age 67, right hemisphere 51.9
Perirhinal gyrus
nTPM: 71.3
1794 Male, age 80, right hemisphere 80.9
1847 Female, age 91, left hemisphere 80.5
1841 Female, age 85, right hemisphere 69.9
2521 Female, age 94, right hemisphere 65.2
2848 Male, age 76, right hemisphere 60.2
Subiculum
nTPM: 49.5
1977 Female, age 85, both hemispheres 58.0
1901 Male, age 80, both hemispheres 56.0
2619 Male, age 74, both hemispheres 49.5
2729 Female, age 91, right hemisphere 48.1
2042 Male, age 76, both hemispheres 44.3
2438 Female, age 94, left hemisphere 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 46.8
Min nTPM: 14.5
Std nTPM: 7.4
Median nTPM: 29.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 46.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 45.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 44.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 44.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 44.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 43.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 43.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 43.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.1
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Subiculum
nTPM: 40.3
Samples: 4

Max nTPM: 48.7
Min nTPM: 32.1
Sample A Female 48.7
Sample B Female 41.0
Sample C Male 39.2
Sample D Male 32.1
Dorsal hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 53.4
Min nTPM: 35.3
Sample A Female 52.8
Sample B Female 53.4
Sample C Male 38.9
Sample D Male 35.3
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 42.7
Min nTPM: 34.9
Sample A Female 39.7
Sample B Female 39.4
Sample C Male 42.7
Sample D Male 34.9
Ventral hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 58.5
Min nTPM: 37.0
Sample A Female 44.0
Sample B Female 37.0
Sample C Male 58.5
Sample D Male 51.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.0
Samples: 4

Max nTPM: 113.5
Min nTPM: 107.8
Sample A Male 108.6
Sample B Male 107.8
Sample C Female 110.2
Sample D Female 113.5
Hippocampal formation
nTPM: 116.9
Samples: 4

Max nTPM: 120.0
Min nTPM: 115.6
Sample A Male 120.0
Sample B Male 116.3
Sample C Female 115.6
Sample D Female 115.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
69735311 Antisense, RP_050503_02_E07, Mouse strain C57BL/6J (56 days, male) 9.8

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