HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.7 nTPM
HPA Brain:26.2 nTPM
GTEx:54.7 nTPM
FANTOM5:25.1 Scaled Tags Per Million
Pig:34.2 nTPM
Mouse:47.7 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.2
2621 Female, age 67, right hemisphere 32.5
1898 Male, age 80, left hemisphere 29.6
1855 Male, age 76, left hemisphere 26.0
2529 Female, age 94, left hemisphere 21.6
1911 Female, age 85, right hemisphere 21.5
2148 Female, age 91, left hemisphere 19.9
Dentate gyrus
nTPM: 23.6
2010 Male, age 76, both hemispheres 29.9
2530 Female, age 94, left hemisphere 29.9
1927 Female, age 91, both hemispheres 24.4
2246 Female, age 85, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.3
2531 Female, age 67, both hemispheres 18.0
Entorhinal gyrus
nTPM: 24.1
2613 Female, age 94, left hemisphere 26.3
2686 Male, age 75, right hemisphere 25.5
2764 Male, age 80, right hemisphere 24.4
1938 Female, age 85, left hemisphere 24.1
2117 Female, age 91, right hemisphere 22.4
1787 Male, age 76, left hemisphere 21.9
Hippocampus, CA1
nTPM: 25.3
2045 Male, age 76, both hemispheres 27.1
2749 Male, age 80, left hemisphere 26.6
2082 Female, age 91, right hemisphere 26.4
1873 Female, age 85, both hemispheres 25.3
2527 Male, age 74, both hemispheres 21.3
Hippocampus, CA2
nTPM: 25.7
1892 Male, age 76, both hemispheres 31.7
2437 Female, age 94, left hemisphere 29.4
1963 Male, age 80, left hemisphere 26.3
2113 Female, age 91, right hemisphere 23.4
1940 Female, age 85, left hemisphere 23.3
2249 Male, age 74, both hemispheres 20.1
Hippocampus, CA3
nTPM: 25.2
1867 Male, age 76, both hemispheres 27.4
2620 Female, age 94, left hemisphere 27.1
2436 Male, age 74, both hemispheres 25.8
1891 Female, age 85, both hemispheres 25.2
2137 Male, age 80, left hemisphere 23.3
2861 Female, age 67, both hemispheres 22.2
Parahippocampal cortex
nTPM: 23.2
1850 Male, age 80, both hemispheres 28.3
2532 Female, age 72, left hemisphere 27.0
2693 Female, age 94, both hemispheres 26.3
2018 Male, age 76, both hemispheres 25.9
2692 Male, age 74, both hemispheres 23.6
1933 Female, age 85, both hemispheres 21.9
2622 Female, age 67, right hemisphere 21.0
1990 Female, age 91, right hemisphere 20.6
2250 Female, age 67, right hemisphere 18.7
2245 Female, age 91, both hemispheres 18.4
Perirhinal gyrus
nTPM: 23.3
1794 Male, age 80, right hemisphere 29.6
1847 Female, age 91, left hemisphere 28.7
1841 Female, age 85, right hemisphere 23.4
2848 Male, age 76, right hemisphere 20.7
2521 Female, age 94, right hemisphere 14.1
Subiculum
nTPM: 26.2
2042 Male, age 76, both hemispheres 36.1
1901 Male, age 80, both hemispheres 31.4
2619 Male, age 74, both hemispheres 27.3
2438 Female, age 94, left hemisphere 22.5
1977 Female, age 85, both hemispheres 20.9
2729 Female, age 91, right hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.7
Samples: 197

Max nTPM: 155.4
Min nTPM: 29.5
Std nTPM: 14.7
Median nTPM: 53.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 155.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 121.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 88.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 84.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 82.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 81.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 81.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 79.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 78.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 78.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.1
FF:10153-102I9 76 years, female 26.4
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.2
Pig sample Sample description nTPM
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 40.9
Min nTPM: 23.1
Sample A Female 40.9
Sample B Female 25.5
Sample C Male 23.1
Sample D Male 23.9
Dorsal hippocampus
nTPM: 34.2
Samples: 4

Max nTPM: 48.6
Min nTPM: 21.6
Sample A Female 48.6
Sample B Female 31.2
Sample C Male 35.3
Sample D Male 21.6
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 38.9
Min nTPM: 24.6
Sample A Female 35.3
Sample B Female 36.9
Sample C Male 38.9
Sample D Male 24.6
Ventral hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 36.1
Min nTPM: 23.8
Sample A Female 32.0
Sample B Female 23.8
Sample C Male 36.1
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.2
Samples: 4

Max nTPM: 46.6
Min nTPM: 39.7
Sample A Male 46.6
Sample B Male 44.7
Sample C Female 45.6
Sample D Female 39.7
Hippocampal formation
nTPM: 47.7
Samples: 4

Max nTPM: 51.4
Min nTPM: 42.0
Sample A Male 49.5
Sample B Male 42.0
Sample C Female 47.9
Sample D Female 51.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
69262344 Antisense, RP_050303_02_C02, Mouse strain C57BL/6J (56 days, male) 9.9

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