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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
141.0
nTPM
Monaco:
56.0
nTPM
Schmiedel:
110.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
141.0
HPA sample
nTPM
gdT-cell nTPM: 99.8
Samples: 6
Max nTPM: 147.6
Min nTPM: 62.6
P10809_1007
62.6
P10809_1022
104.9
P10809_1041
147.6
P10809_1060
88.2
P10809_1077
92.0
P10809_1098
103.5
MAIT T-cell nTPM: 90.5
Samples: 6
Max nTPM: 106.6
Min nTPM: 57.4
P10809_1006
57.4
P10809_1024
106.6
P10809_1043
100.0
P10809_1062
88.5
P10809_1083
92.5
P10809_1097
98.2
Memory CD4 T-cell nTPM: 91.8
Samples: 6
Max nTPM: 104.2
Min nTPM: 66.0
P10809_1014
66.0
P10809_1026
101.3
P10809_1045
104.2
P10809_1064
88.5
P10809_1086
87.1
P10809_1113
103.9
Memory CD8 T-cell nTPM: 101.0
Samples: 5
Max nTPM: 126.3
Min nTPM: 58.6
P10809_1012
58.6
P10809_1027
126.3
P10809_1046
116.8
P10809_1065
90.1
P10809_1111
113.2
Naive CD4 T-cell nTPM: 84.3
Samples: 6
Max nTPM: 116.5
Min nTPM: 47.5
P10809_1015
47.5
P10809_1030
91.7
P10809_1049
116.5
P10809_1068
73.5
P10809_1085
99.1
P10809_1112
77.3
Naive CD8 T-cell nTPM: 85.4
Samples: 6
Max nTPM: 106.0
Min nTPM: 55.1
P10809_1016
55.1
P10809_1031
106.0
P10809_1050
80.9
P10809_1069
97.8
P10809_1087
82.3
P10809_1110
90.4
T-reg nTPM: 141.0
Samples: 6
Max nTPM: 217.4
Min nTPM: 84.0
P10809_1018
84.0
P10809_1037
128.9
P10809_1056
217.4
P10809_1075
128.8
P10809_1094
144.9
P10809_1106
141.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.2
Samples: 4
Max nTPM: 45.3
Min nTPM: 26.4
RHH5202_R3573
31.9
RHH5230_R3602
26.4
RHH5259_R3631
33.2
RHH5288_R3660
45.3
Effector memory CD8 T-cell nTPM: 35.6
Samples: 4
Max nTPM: 43.9
Min nTPM: 17.9
RHH5203_R3574
37.8
RHH5231_R3603
42.6
RHH5260_R3632
43.9
RHH5289_R3661
17.9
MAIT T-cell nTPM: 39.7
Samples: 4
Max nTPM: 60.8
Min nTPM: 22.1
RHH5233_R3605
40.7
RHH5205_R3576
22.1
RHH5262_R3634
35.0
RHH5297_R3663
60.8
Memory CD4 T-cell TFH nTPM: 56.0
Samples: 4
Max nTPM: 88.0
Min nTPM: 35.3
RHH5300_R3666
58.3
RHH5236_R3608
88.0
RHH5265_R3637
35.3
RHH5208_R3579
42.5
Memory CD4 T-cell Th1 nTPM: 47.0
Samples: 4
Max nTPM: 69.8
Min nTPM: 34.5
RHH5210_R3581
39.8
RHH5302_R3668
69.8
RHH5238_R3610
44.0
RHH5267_R3639
34.5
Memory CD4 T-cell Th1/Th17 nTPM: 44.3
Samples: 4
Max nTPM: 65.5
Min nTPM: 25.4
RHH5303_R3669
65.5
RHH5211_R3582
44.8
RHH5239_R3611
25.4
RHH5268_R3640
41.4
Memory CD4 T-cell Th17 nTPM: 32.1
Samples: 4
Max nTPM: 43.4
Min nTPM: 25.7
RHH5304_R3670
25.7
RHH5212_R3583
43.4
RHH5240_R3612
25.8
RHH5269_R3641
33.6
Memory CD4 T-cell Th2 nTPM: 39.5
Samples: 4
Max nTPM: 46.4
Min nTPM: 31.5
RHH5305_R3671
46.4
RHH5213_R3584
31.5
RHH5241_R3613
46.1
RHH5270_R3642
34.1
Naive CD4 T-cell nTPM: 28.9
Samples: 4
Max nTPM: 35.6
Min nTPM: 23.6
RHH5306_R3672
32.5
RHH5214_R3585
35.6
RHH5242_R3614
23.6
RHH5271_R3643
23.8
Naive CD8 T-cell nTPM: 21.1
Samples: 4
Max nTPM: 25.6
Min nTPM: 17.5
RHH5201_R3572
23.6
RHH5229_R3601
17.5
RHH5258_R3630
25.6
RHH5287_R3659
17.7
Non-Vd2 gdTCR nTPM: 41.3
Samples: 4
Max nTPM: 60.0
Min nTPM: 21.2
RHH5235_R3607
29.5
RHH5264_R3636
54.3
RHH5207_R3578
21.2
RHH5299_R3665
60.0
T-reg nTPM: 44.2
Samples: 4
Max nTPM: 65.2
Min nTPM: 27.8
RHH5301_R3667
65.2
RHH5237_R3609
52.8
RHH5266_R3638
30.8
RHH5209_R3580
27.8
Terminal effector memory CD4 T-cell nTPM: 33.8
Samples: 2
Max nTPM: 38.7
Min nTPM: 28.9
RHH5243_R3615
28.9
RHH5272_R3644
38.7
Terminal effector memory CD8 T-cell nTPM: 51.1
Samples: 4
Max nTPM: 79.5
Min nTPM: 39.3
RHH5232_R3604
39.6
RHH5204_R3575
79.5
RHH5261_R3633
39.3
RHH5296_R3662
46.1
Vd2 gdTCR nTPM: 53.3
Samples: 4
Max nTPM: 86.9
Min nTPM: 27.0
RHH5234_R3606
27.4
RHH5206_R3577
86.9
RHH5263_R3635
27.0
RHH5298_R3664
71.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
