HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:37.9 nTPM
HPA Brain:20.0 nTPM
GTEx:37.9 nTPM
FANTOM5:40.8 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:26.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011145
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1898 Male, age 80, left hemisphere 20.7
1855 Male, age 76, left hemisphere 19.1
2529 Female, age 94, left hemisphere 17.1
2148 Female, age 91, left hemisphere 15.2
1911 Female, age 85, right hemisphere 14.7
2621 Female, age 67, right hemisphere 12.0
Dentate gyrus
nTPM: 16.8
2528 Male, age 74, both hemispheres 18.9
1927 Female, age 91, both hemispheres 18.1
2530 Female, age 94, left hemisphere 18.1
2246 Female, age 85, both hemispheres 17.3
2010 Male, age 76, both hemispheres 15.9
2531 Female, age 67, both hemispheres 12.8
Entorhinal gyrus
nTPM: 15.6
1787 Male, age 76, left hemisphere 17.7
1938 Female, age 85, left hemisphere 17.4
2117 Female, age 91, right hemisphere 16.4
2764 Male, age 80, right hemisphere 16.2
2686 Male, age 75, right hemisphere 13.4
2613 Female, age 94, left hemisphere 12.4
Hippocampus, CA1
nTPM: 16.9
2749 Male, age 80, left hemisphere 19.9
1873 Female, age 85, both hemispheres 18.4
2527 Male, age 74, both hemispheres 17.0
2082 Female, age 91, right hemisphere 15.3
2045 Male, age 76, both hemispheres 13.9
Hippocampus, CA2
nTPM: 17.0
2249 Male, age 74, both hemispheres 20.4
1963 Male, age 80, left hemisphere 17.1
1940 Female, age 85, left hemisphere 16.9
1892 Male, age 76, both hemispheres 16.1
2437 Female, age 94, left hemisphere 15.9
2113 Female, age 91, right hemisphere 15.6
Hippocampus, CA3
nTPM: 14.7
2137 Male, age 80, left hemisphere 18.7
2436 Male, age 74, both hemispheres 15.6
1891 Female, age 85, both hemispheres 15.3
1867 Male, age 76, both hemispheres 14.4
2620 Female, age 94, left hemisphere 14.4
2861 Female, age 67, both hemispheres 9.8
Parahippocampal cortex
nTPM: 15.9
1850 Male, age 80, both hemispheres 20.2
1990 Female, age 91, right hemisphere 18.8
2245 Female, age 91, both hemispheres 17.9
2250 Female, age 67, right hemisphere 16.8
1933 Female, age 85, both hemispheres 16.7
2018 Male, age 76, both hemispheres 16.3
2532 Female, age 72, left hemisphere 15.3
2693 Female, age 94, both hemispheres 14.4
2622 Female, age 67, right hemisphere 11.4
2692 Male, age 74, both hemispheres 11.1
Perirhinal gyrus
nTPM: 20.0
1841 Female, age 85, right hemisphere 23.2
2521 Female, age 94, right hemisphere 20.7
1794 Male, age 80, right hemisphere 20.5
1847 Female, age 91, left hemisphere 18.3
2848 Male, age 76, right hemisphere 17.2
Subiculum
nTPM: 14.8
1977 Female, age 85, both hemispheres 18.1
1901 Male, age 80, both hemispheres 15.6
2042 Male, age 76, both hemispheres 15.2
2729 Female, age 91, right hemisphere 14.6
2438 Female, age 94, left hemisphere 13.4
2619 Male, age 74, both hemispheres 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.9
Samples: 197

Max nTPM: 128.3
Min nTPM: 15.9
Std nTPM: 10.5
Median nTPM: 36.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 128.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 65.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 65.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 57.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 57.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 53.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 50.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.8
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 32.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.4
Sample A Female 23.7
Sample B Female 16.3
Sample C Male 15.4
Sample D Male 16.1
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 25.2
Min nTPM: 15.8
Sample A Female 25.2
Sample B Female 17.9
Sample C Male 18.6
Sample D Male 15.8
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 14.2
Sample A Female 21.7
Sample B Female 18.2
Sample C Male 16.8
Sample D Male 14.2
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.9
Sample A Female 22.0
Sample B Female 16.0
Sample C Male 15.9
Sample D Male 18.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 28.7
Min nTPM: 24.7
Sample A Male 28.7
Sample B Male 27.1
Sample C Female 26.8
Sample D Female 24.7
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 23.0
Sample A Male 27.0
Sample B Male 24.2
Sample C Female 25.9
Sample D Female 23.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71213081 Antisense, RP_050816_03_G11, Mouse strain C57BL/6J (56 days, male) 0.1

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