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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
254.3
nTPM
Monaco:
129.0
nTPM
Schmiedel:
78.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
254.3
HPA sample
nTPM
gdT-cell nTPM: 177.9
Samples: 6
Max nTPM: 242.5
Min nTPM: 109.0
P10809_1007
109.0
P10809_1022
177.1
P10809_1041
242.5
P10809_1060
167.6
P10809_1077
191.5
P10809_1098
179.8
MAIT T-cell nTPM: 220.4
Samples: 6
Max nTPM: 302.4
Min nTPM: 115.2
P10809_1006
115.2
P10809_1024
302.4
P10809_1043
247.9
P10809_1062
217.9
P10809_1083
180.1
P10809_1097
258.7
Memory CD4 T-cell nTPM: 222.9
Samples: 6
Max nTPM: 274.9
Min nTPM: 123.0
P10809_1014
123.0
P10809_1026
274.9
P10809_1045
255.6
P10809_1064
202.6
P10809_1086
240.7
P10809_1113
240.8
Memory CD8 T-cell nTPM: 195.8
Samples: 5
Max nTPM: 253.8
Min nTPM: 107.8
P10809_1012
107.8
P10809_1027
207.7
P10809_1046
202.0
P10809_1065
207.8
P10809_1111
253.8
Naive CD4 T-cell nTPM: 254.3
Samples: 6
Max nTPM: 390.0
Min nTPM: 129.6
P10809_1015
129.6
P10809_1030
302.5
P10809_1049
390.0
P10809_1068
216.2
P10809_1085
246.7
P10809_1112
240.5
Naive CD8 T-cell nTPM: 195.7
Samples: 6
Max nTPM: 249.6
Min nTPM: 130.6
P10809_1016
130.6
P10809_1031
194.4
P10809_1050
249.6
P10809_1069
182.2
P10809_1087
218.6
P10809_1110
199.0
T-reg nTPM: 242.2
Samples: 6
Max nTPM: 346.4
Min nTPM: 105.2
P10809_1018
105.2
P10809_1037
244.0
P10809_1056
346.4
P10809_1075
214.2
P10809_1094
254.9
P10809_1106
288.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 94.6
Samples: 4
Max nTPM: 110.9
Min nTPM: 65.6
RHH5202_R3573
65.6
RHH5230_R3602
104.9
RHH5259_R3631
97.0
RHH5288_R3660
110.9
Effector memory CD8 T-cell nTPM: 84.5
Samples: 4
Max nTPM: 102.9
Min nTPM: 70.3
RHH5203_R3574
79.7
RHH5231_R3603
102.9
RHH5260_R3632
85.0
RHH5289_R3661
70.3
MAIT T-cell nTPM: 103.2
Samples: 4
Max nTPM: 131.5
Min nTPM: 67.6
RHH5233_R3605
98.9
RHH5205_R3576
67.6
RHH5262_R3634
114.7
RHH5297_R3663
131.5
Memory CD4 T-cell TFH nTPM: 110.2
Samples: 4
Max nTPM: 170.5
Min nTPM: 79.4
RHH5300_R3666
96.2
RHH5236_R3608
170.5
RHH5265_R3637
94.6
RHH5208_R3579
79.4
Memory CD4 T-cell Th1 nTPM: 98.4
Samples: 4
Max nTPM: 138.3
Min nTPM: 74.9
RHH5210_R3581
82.3
RHH5302_R3668
138.3
RHH5238_R3610
98.0
RHH5267_R3639
74.9
Memory CD4 T-cell Th1/Th17 nTPM: 100.9
Samples: 4
Max nTPM: 160.8
Min nTPM: 57.7
RHH5303_R3669
160.8
RHH5211_R3582
92.5
RHH5239_R3611
57.7
RHH5268_R3640
92.4
Memory CD4 T-cell Th17 nTPM: 80.9
Samples: 4
Max nTPM: 88.9
Min nTPM: 68.0
RHH5304_R3670
86.9
RHH5212_R3583
88.9
RHH5240_R3612
79.8
RHH5269_R3641
68.0
Memory CD4 T-cell Th2 nTPM: 87.5
Samples: 4
Max nTPM: 96.4
Min nTPM: 72.4
RHH5305_R3671
84.7
RHH5213_R3584
96.3
RHH5241_R3613
96.4
RHH5270_R3642
72.4
Naive CD4 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 130.1
Min nTPM: 82.4
RHH5306_R3672
84.6
RHH5214_R3585
130.1
RHH5242_R3614
95.3
RHH5271_R3643
82.4
Naive CD8 T-cell nTPM: 77.4
Samples: 4
Max nTPM: 87.3
Min nTPM: 55.3
RHH5201_R3572
85.8
RHH5229_R3601
55.3
RHH5258_R3630
87.3
RHH5287_R3659
81.0
Non-Vd2 gdTCR nTPM: 92.4
Samples: 4
Max nTPM: 130.8
Min nTPM: 53.5
RHH5235_R3607
53.5
RHH5264_R3636
130.8
RHH5207_R3578
79.8
RHH5299_R3665
105.6
T-reg nTPM: 99.9
Samples: 4
Max nTPM: 128.1
Min nTPM: 73.3
RHH5301_R3667
116.1
RHH5237_R3609
128.1
RHH5266_R3638
73.3
RHH5209_R3580
82.1
Terminal effector memory CD4 T-cell nTPM: 97.6
Samples: 2
Max nTPM: 119.2
Min nTPM: 75.9
RHH5243_R3615
75.9
RHH5272_R3644
119.2
Terminal effector memory CD8 T-cell nTPM: 129.1
Samples: 4
Max nTPM: 160.5
Min nTPM: 96.1
RHH5232_R3604
128.1
RHH5204_R3575
160.5
RHH5261_R3633
131.5
RHH5296_R3662
96.1
Vd2 gdTCR nTPM: 128.3
Samples: 4
Max nTPM: 170.4
Min nTPM: 84.2
RHH5234_R3606
117.3
RHH5206_R3577
170.4
RHH5263_R3635
84.2
RHH5298_R3664
141.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
