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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.6
nTPM
Monaco:
345.4
nTPM
Schmiedel:
138.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.6
HPA sample
nTPM
gdT-cell nTPM: 37.0
Samples: 6
Max nTPM: 44.5
Min nTPM: 25.4
P10809_1007
31.9
P10809_1022
43.1
P10809_1041
25.4
P10809_1060
39.7
P10809_1077
37.1
P10809_1098
44.5
MAIT T-cell nTPM: 39.2
Samples: 6
Max nTPM: 43.5
Min nTPM: 28.5
P10809_1006
43.4
P10809_1024
41.2
P10809_1043
28.5
P10809_1062
38.1
P10809_1083
40.3
P10809_1097
43.5
Memory CD4 T-cell nTPM: 52.0
Samples: 6
Max nTPM: 62.6
Min nTPM: 43.4
P10809_1014
52.9
P10809_1026
43.4
P10809_1045
50.2
P10809_1064
49.1
P10809_1086
54.0
P10809_1113
62.6
Memory CD8 T-cell nTPM: 42.2
Samples: 5
Max nTPM: 58.0
Min nTPM: 34.7
P10809_1012
44.6
P10809_1027
38.2
P10809_1046
34.7
P10809_1065
35.3
P10809_1111
58.0
Naive CD4 T-cell nTPM: 99.7
Samples: 6
Max nTPM: 116.4
Min nTPM: 83.8
P10809_1015
114.1
P10809_1030
83.8
P10809_1049
91.4
P10809_1068
116.4
P10809_1085
84.3
P10809_1112
108.0
Naive CD8 T-cell nTPM: 75.4
Samples: 6
Max nTPM: 94.1
Min nTPM: 52.4
P10809_1016
82.5
P10809_1031
83.3
P10809_1050
67.7
P10809_1069
72.5
P10809_1087
52.4
P10809_1110
94.1
T-reg nTPM: 63.5
Samples: 6
Max nTPM: 74.1
Min nTPM: 55.8
P10809_1018
64.9
P10809_1037
63.9
P10809_1056
61.2
P10809_1075
61.0
P10809_1094
55.8
P10809_1106
74.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
345.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 197.4
Samples: 4
Max nTPM: 213.7
Min nTPM: 173.0
RHH5202_R3573
199.8
RHH5230_R3602
213.7
RHH5259_R3631
173.0
RHH5288_R3660
203.1
Effector memory CD8 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 207.7
Min nTPM: 146.6
RHH5203_R3574
146.6
RHH5231_R3603
164.7
RHH5260_R3632
173.0
RHH5289_R3661
207.7
MAIT T-cell nTPM: 174.4
Samples: 4
Max nTPM: 196.2
Min nTPM: 146.8
RHH5233_R3605
182.1
RHH5205_R3576
172.3
RHH5262_R3634
196.2
RHH5297_R3663
146.8
Memory CD4 T-cell TFH nTPM: 240.6
Samples: 4
Max nTPM: 252.4
Min nTPM: 210.7
RHH5300_R3666
210.7
RHH5236_R3608
251.0
RHH5265_R3637
248.4
RHH5208_R3579
252.4
Memory CD4 T-cell Th1 nTPM: 226.5
Samples: 4
Max nTPM: 237.7
Min nTPM: 218.6
RHH5210_R3581
237.7
RHH5302_R3668
218.6
RHH5238_R3610
225.9
RHH5267_R3639
223.6
Memory CD4 T-cell Th1/Th17 nTPM: 202.9
Samples: 4
Max nTPM: 285.2
Min nTPM: 134.1
RHH5303_R3669
194.3
RHH5211_R3582
134.1
RHH5239_R3611
285.2
RHH5268_R3640
198.1
Memory CD4 T-cell Th17 nTPM: 214.9
Samples: 4
Max nTPM: 271.9
Min nTPM: 155.5
RHH5304_R3670
220.4
RHH5212_R3583
155.5
RHH5240_R3612
271.9
RHH5269_R3641
211.9
Memory CD4 T-cell Th2 nTPM: 208.0
Samples: 4
Max nTPM: 238.7
Min nTPM: 153.8
RHH5305_R3671
228.9
RHH5213_R3584
153.8
RHH5241_R3613
238.7
RHH5270_R3642
210.4
Naive CD4 T-cell nTPM: 345.4
Samples: 4
Max nTPM: 392.6
Min nTPM: 324.6
RHH5306_R3672
335.8
RHH5214_R3585
324.6
RHH5242_R3614
328.5
RHH5271_R3643
392.6
Naive CD8 T-cell nTPM: 331.4
Samples: 4
Max nTPM: 355.8
Min nTPM: 294.1
RHH5201_R3572
354.8
RHH5229_R3601
355.8
RHH5258_R3630
294.1
RHH5287_R3659
320.8
Non-Vd2 gdTCR nTPM: 159.0
Samples: 4
Max nTPM: 194.4
Min nTPM: 134.8
RHH5235_R3607
165.4
RHH5264_R3636
194.4
RHH5207_R3578
134.8
RHH5299_R3665
141.5
T-reg nTPM: 237.4
Samples: 4
Max nTPM: 259.9
Min nTPM: 200.0
RHH5301_R3667
200.0
RHH5237_R3609
259.9
RHH5266_R3638
248.8
RHH5209_R3580
240.9
Terminal effector memory CD4 T-cell nTPM: 190.1
Samples: 2
Max nTPM: 215.4
Min nTPM: 164.8
RHH5243_R3615
164.8
RHH5272_R3644
215.4
Terminal effector memory CD8 T-cell nTPM: 158.2
Samples: 4
Max nTPM: 194.6
Min nTPM: 119.5
RHH5232_R3604
194.6
RHH5204_R3575
119.5
RHH5261_R3633
165.3
RHH5296_R3662
153.5
Vd2 gdTCR nTPM: 181.7
Samples: 4
Max nTPM: 238.9
Min nTPM: 144.1
RHH5234_R3606
176.7
RHH5206_R3577
167.1
RHH5263_R3635
238.9
RHH5298_R3664
144.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
