HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.7 nTPM
HPA Brain:63.2 nTPM
GTEx:27.7 nTPM
FANTOM5:28.2 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:46.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030383Antibody HPA030384
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.2
Sample id Sample description nTPM
Hippocampus
nTPM: 62.6
1898 Male, age 80, left hemisphere 73.7
2621 Female, age 67, right hemisphere 70.5
2148 Female, age 91, left hemisphere 63.5
2529 Female, age 94, left hemisphere 58.9
1855 Male, age 76, left hemisphere 54.6
1911 Female, age 85, right hemisphere 54.2
Dentate gyrus
nTPM: 59.4
1927 Female, age 91, both hemispheres 69.5
2531 Female, age 67, both hemispheres 63.4
2530 Female, age 94, left hemisphere 59.8
2010 Male, age 76, both hemispheres 59.0
2528 Male, age 74, both hemispheres 54.9
2246 Female, age 85, both hemispheres 50.0
Entorhinal gyrus
nTPM: 54.5
2764 Male, age 80, right hemisphere 61.4
1938 Female, age 85, left hemisphere 58.9
2613 Female, age 94, left hemisphere 54.0
1787 Male, age 76, left hemisphere 53.3
2117 Female, age 91, right hemisphere 50.2
2686 Male, age 75, right hemisphere 49.3
Hippocampus, CA1
nTPM: 60.8
2749 Male, age 80, left hemisphere 78.9
1873 Female, age 85, both hemispheres 60.4
2045 Male, age 76, both hemispheres 59.6
2527 Male, age 74, both hemispheres 58.8
2082 Female, age 91, right hemisphere 46.4
Hippocampus, CA2
nTPM: 59.5
1963 Male, age 80, left hemisphere 76.0
1892 Male, age 76, both hemispheres 65.9
1940 Female, age 85, left hemisphere 57.2
2249 Male, age 74, both hemispheres 57.0
2437 Female, age 94, left hemisphere 51.2
2113 Female, age 91, right hemisphere 49.9
Hippocampus, CA3
nTPM: 63.2
2861 Female, age 67, both hemispheres 71.4
2137 Male, age 80, left hemisphere 70.3
1867 Male, age 76, both hemispheres 67.2
2620 Female, age 94, left hemisphere 63.9
1891 Female, age 85, both hemispheres 54.6
2436 Male, age 74, both hemispheres 51.5
Parahippocampal cortex
nTPM: 54.7
1850 Male, age 80, both hemispheres 62.6
2622 Female, age 67, right hemisphere 60.7
2018 Male, age 76, both hemispheres 58.0
2532 Female, age 72, left hemisphere 56.0
1933 Female, age 85, both hemispheres 55.5
1990 Female, age 91, right hemisphere 55.2
2245 Female, age 91, both hemispheres 54.7
2250 Female, age 67, right hemisphere 53.8
2692 Male, age 74, both hemispheres 45.5
2693 Female, age 94, both hemispheres 44.9
Perirhinal gyrus
nTPM: 57.3
1847 Female, age 91, left hemisphere 66.2
1794 Male, age 80, right hemisphere 60.3
2521 Female, age 94, right hemisphere 58.9
1841 Female, age 85, right hemisphere 54.0
2848 Male, age 76, right hemisphere 47.1
Subiculum
nTPM: 53.9
1901 Male, age 80, both hemispheres 59.8
2729 Female, age 91, right hemisphere 59.2
1977 Female, age 85, both hemispheres 56.8
2619 Male, age 74, both hemispheres 52.1
2042 Male, age 76, both hemispheres 49.0
2438 Female, age 94, left hemisphere 46.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 62.7
Min nTPM: 10.8
Std nTPM: 9.2
Median nTPM: 25.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 62.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 55.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 52.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 49.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 49.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 47.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 47.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 46.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.2
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 27.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 32.4
Min nTPM: 26.1
Sample A Female 32.4
Sample B Female 26.4
Sample C Male 26.1
Sample D Male 27.3
Dorsal hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.2
Sample A Female 30.5
Sample B Female 26.8
Sample C Male 31.2
Sample D Male 23.2
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 30.5
Sample A Female 32.5
Sample B Female 39.6
Sample C Male 36.2
Sample D Male 30.5
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 29.5
Min nTPM: 23.2
Sample A Female 24.2
Sample B Female 23.2
Sample C Male 27.0
Sample D Male 29.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.3
Samples: 4

Max nTPM: 48.5
Min nTPM: 43.4
Sample A Male 46.2
Sample B Male 48.5
Sample C Female 47.1
Sample D Female 43.4
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 50.0
Min nTPM: 42.6
Sample A Male 50.0
Sample B Male 46.5
Sample C Female 42.6
Sample D Female 46.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68920767 Antisense, RP_050303_01_B10, Mouse strain C57BL/6J (56 days, male) 3.1

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