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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.0
nTPM
Monaco:
13.1
nTPM
Schmiedel:
6.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.0
HPA sample
nTPM
gdT-cell nTPM: 8.6
Samples: 6
Max nTPM: 13.4
Min nTPM: 3.0
P10809_1007
6.0
P10809_1022
10.8
P10809_1041
13.4
P10809_1060
6.8
P10809_1077
11.7
P10809_1098
3.0
MAIT T-cell nTPM: 8.8
Samples: 6
Max nTPM: 11.5
Min nTPM: 5.9
P10809_1006
7.9
P10809_1024
10.1
P10809_1043
10.5
P10809_1062
11.5
P10809_1083
5.9
P10809_1097
6.8
Memory CD4 T-cell nTPM: 11.2
Samples: 6
Max nTPM: 12.9
Min nTPM: 8.2
P10809_1014
9.3
P10809_1026
12.9
P10809_1045
12.1
P10809_1064
8.2
P10809_1086
12.3
P10809_1113
12.6
Memory CD8 T-cell nTPM: 9.2
Samples: 5
Max nTPM: 10.9
Min nTPM: 8.3
P10809_1012
9.2
P10809_1027
8.3
P10809_1046
8.8
P10809_1065
8.7
P10809_1111
10.9
Naive CD4 T-cell nTPM: 11.9
Samples: 6
Max nTPM: 18.7
Min nTPM: 6.3
P10809_1015
6.3
P10809_1030
10.2
P10809_1049
14.1
P10809_1068
13.4
P10809_1085
18.7
P10809_1112
8.5
Naive CD8 T-cell nTPM: 8.7
Samples: 6
Max nTPM: 11.8
Min nTPM: 5.0
P10809_1016
5.0
P10809_1031
5.9
P10809_1050
8.2
P10809_1069
11.8
P10809_1087
11.7
P10809_1110
9.5
T-reg nTPM: 12.1
Samples: 6
Max nTPM: 18.8
Min nTPM: 7.1
P10809_1018
9.5
P10809_1037
18.8
P10809_1056
7.8
P10809_1075
12.5
P10809_1094
16.7
P10809_1106
7.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 15.1
Min nTPM: 9.4
RHH5202_R3573
11.8
RHH5230_R3602
11.4
RHH5259_R3631
9.4
RHH5288_R3660
15.1
Effector memory CD8 T-cell nTPM: 11.3
Samples: 4
Max nTPM: 14.8
Min nTPM: 5.9
RHH5203_R3574
14.8
RHH5231_R3603
5.9
RHH5260_R3632
12.4
RHH5289_R3661
12.0
MAIT T-cell nTPM: 10.1
Samples: 4
Max nTPM: 15.4
Min nTPM: 5.0
RHH5233_R3605
8.0
RHH5205_R3576
15.4
RHH5262_R3634
5.0
RHH5297_R3663
12.0
Memory CD4 T-cell TFH nTPM: 10.9
Samples: 4
Max nTPM: 13.8
Min nTPM: 8.2
RHH5300_R3666
8.2
RHH5236_R3608
11.2
RHH5265_R3637
10.3
RHH5208_R3579
13.8
Memory CD4 T-cell Th1 nTPM: 9.3
Samples: 4
Max nTPM: 16.5
Min nTPM: 4.7
RHH5210_R3581
4.7
RHH5302_R3668
7.3
RHH5238_R3610
8.8
RHH5267_R3639
16.5
Memory CD4 T-cell Th1/Th17 nTPM: 10.0
Samples: 4
Max nTPM: 14.2
Min nTPM: 2.0
RHH5303_R3669
14.2
RHH5211_R3582
2.0
RHH5239_R3611
10.9
RHH5268_R3640
12.9
Memory CD4 T-cell Th17 nTPM: 9.2
Samples: 4
Max nTPM: 15.0
Min nTPM: 3.7
RHH5304_R3670
15.0
RHH5212_R3583
3.7
RHH5240_R3612
7.5
RHH5269_R3641
10.4
Memory CD4 T-cell Th2 nTPM: 10.1
Samples: 4
Max nTPM: 12.8
Min nTPM: 7.2
RHH5305_R3671
8.7
RHH5213_R3584
7.2
RHH5241_R3613
11.7
RHH5270_R3642
12.8
Naive CD4 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 10.2
Min nTPM: 8.3
RHH5306_R3672
10.2
RHH5214_R3585
8.4
RHH5242_R3614
8.4
RHH5271_R3643
8.3
Naive CD8 T-cell nTPM: 11.1
Samples: 4
Max nTPM: 13.6
Min nTPM: 8.9
RHH5201_R3572
13.6
RHH5229_R3601
8.9
RHH5258_R3630
11.1
RHH5287_R3659
10.8
Non-Vd2 gdTCR nTPM: 10.0
Samples: 4
Max nTPM: 13.7
Min nTPM: 5.9
RHH5235_R3607
5.9
RHH5264_R3636
13.7
RHH5207_R3578
12.4
RHH5299_R3665
8.1
T-reg nTPM: 10.0
Samples: 4
Max nTPM: 12.0
Min nTPM: 6.4
RHH5301_R3667
10.0
RHH5237_R3609
12.0
RHH5266_R3638
6.4
RHH5209_R3580
11.7
Terminal effector memory CD4 T-cell nTPM: 13.1
Samples: 2
Max nTPM: 16.0
Min nTPM: 10.1
RHH5243_R3615
16.0
RHH5272_R3644
10.1
Terminal effector memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 15.6
Min nTPM: 6.9
RHH5232_R3604
7.5
RHH5204_R3575
10.3
RHH5261_R3633
6.9
RHH5296_R3662
15.6
Vd2 gdTCR nTPM: 8.0
Samples: 4
Max nTPM: 11.9
Min nTPM: 5.1
RHH5234_R3606
8.5
RHH5206_R3577
6.4
RHH5263_R3635
11.9
RHH5298_R3664
5.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
