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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.5
nTPM
Monaco:
61.5
nTPM
Schmiedel:
65.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.5
HPA sample
nTPM
gdT-cell nTPM: 53.8
Samples: 6
Max nTPM: 63.4
Min nTPM: 48.3
P10809_1007
48.3
P10809_1022
63.4
P10809_1041
59.8
P10809_1060
50.7
P10809_1077
48.9
P10809_1098
51.7
MAIT T-cell nTPM: 65.3
Samples: 6
Max nTPM: 90.7
Min nTPM: 38.0
P10809_1006
53.3
P10809_1024
86.6
P10809_1043
90.7
P10809_1062
68.4
P10809_1083
38.0
P10809_1097
55.0
Memory CD4 T-cell nTPM: 74.5
Samples: 6
Max nTPM: 99.6
Min nTPM: 54.8
P10809_1014
71.0
P10809_1026
99.6
P10809_1045
95.2
P10809_1064
62.8
P10809_1086
54.8
P10809_1113
63.8
Memory CD8 T-cell nTPM: 65.9
Samples: 5
Max nTPM: 72.9
Min nTPM: 57.9
P10809_1012
70.1
P10809_1027
67.7
P10809_1046
72.9
P10809_1065
57.9
P10809_1111
60.8
Naive CD4 T-cell nTPM: 84.5
Samples: 6
Max nTPM: 113.2
Min nTPM: 68.8
P10809_1015
76.4
P10809_1030
82.4
P10809_1049
113.2
P10809_1068
84.9
P10809_1085
81.5
P10809_1112
68.8
Naive CD8 T-cell nTPM: 66.7
Samples: 6
Max nTPM: 97.3
Min nTPM: 45.6
P10809_1016
75.0
P10809_1031
97.3
P10809_1050
54.5
P10809_1069
70.3
P10809_1087
45.6
P10809_1110
57.5
T-reg nTPM: 78.9
Samples: 6
Max nTPM: 88.2
Min nTPM: 68.7
P10809_1018
68.7
P10809_1037
69.2
P10809_1056
88.2
P10809_1075
85.1
P10809_1094
84.7
P10809_1106
77.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 40.3
Samples: 4
Max nTPM: 69.3
Min nTPM: 20.8
RHH5202_R3573
69.3
RHH5230_R3602
20.8
RHH5259_R3631
27.5
RHH5288_R3660
43.6
Effector memory CD8 T-cell nTPM: 38.1
Samples: 4
Max nTPM: 45.9
Min nTPM: 32.5
RHH5203_R3574
45.9
RHH5231_R3603
40.8
RHH5260_R3632
33.1
RHH5289_R3661
32.5
MAIT T-cell nTPM: 48.7
Samples: 4
Max nTPM: 56.7
Min nTPM: 36.7
RHH5233_R3605
36.7
RHH5205_R3576
54.1
RHH5262_R3634
56.7
RHH5297_R3663
47.1
Memory CD4 T-cell TFH nTPM: 61.5
Samples: 4
Max nTPM: 69.2
Min nTPM: 48.7
RHH5300_R3666
60.0
RHH5236_R3608
69.2
RHH5265_R3637
48.7
RHH5208_R3579
68.0
Memory CD4 T-cell Th1 nTPM: 52.5
Samples: 4
Max nTPM: 78.8
Min nTPM: 28.1
RHH5210_R3581
78.8
RHH5302_R3668
70.3
RHH5238_R3610
28.1
RHH5267_R3639
32.7
Memory CD4 T-cell Th1/Th17 nTPM: 60.2
Samples: 4
Max nTPM: 107.8
Min nTPM: 22.5
RHH5303_R3669
74.9
RHH5211_R3582
107.8
RHH5239_R3611
22.5
RHH5268_R3640
35.7
Memory CD4 T-cell Th17 nTPM: 46.8
Samples: 4
Max nTPM: 84.9
Min nTPM: 29.9
RHH5304_R3670
39.2
RHH5212_R3583
84.9
RHH5240_R3612
33.3
RHH5269_R3641
29.9
Memory CD4 T-cell Th2 nTPM: 56.9
Samples: 4
Max nTPM: 66.7
Min nTPM: 43.9
RHH5305_R3671
66.7
RHH5213_R3584
63.6
RHH5241_R3613
53.5
RHH5270_R3642
43.9
Naive CD4 T-cell nTPM: 60.0
Samples: 4
Max nTPM: 81.7
Min nTPM: 38.2
RHH5306_R3672
81.7
RHH5214_R3585
62.7
RHH5242_R3614
57.3
RHH5271_R3643
38.2
Naive CD8 T-cell nTPM: 48.9
Samples: 4
Max nTPM: 76.5
Min nTPM: 17.6
RHH5201_R3572
76.5
RHH5229_R3601
17.6
RHH5258_R3630
54.6
RHH5287_R3659
46.9
Non-Vd2 gdTCR nTPM: 42.2
Samples: 4
Max nTPM: 57.5
Min nTPM: 17.8
RHH5235_R3607
17.8
RHH5264_R3636
57.5
RHH5207_R3578
44.2
RHH5299_R3665
49.3
T-reg nTPM: 55.9
Samples: 4
Max nTPM: 68.2
Min nTPM: 44.8
RHH5301_R3667
68.2
RHH5237_R3609
65.4
RHH5266_R3638
45.3
RHH5209_R3580
44.8
Terminal effector memory CD4 T-cell nTPM: 43.6
Samples: 2
Max nTPM: 60.6
Min nTPM: 26.5
RHH5243_R3615
26.5
RHH5272_R3644
60.6
Terminal effector memory CD8 T-cell nTPM: 50.0
Samples: 4
Max nTPM: 63.1
Min nTPM: 35.3
RHH5232_R3604
48.7
RHH5204_R3575
63.1
RHH5261_R3633
35.3
RHH5296_R3662
52.9
Vd2 gdTCR nTPM: 42.5
Samples: 4
Max nTPM: 59.3
Min nTPM: 30.6
RHH5234_R3606
37.4
RHH5206_R3577
59.3
RHH5263_R3635
30.6
RHH5298_R3664
42.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
