HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.7 nTPM
HPA Brain:44.3 nTPM
GTEx:23.7 nTPM
FANTOM5:34.0 Scaled Tags Per Million
Pig:17.8 nTPM
Mouse:7.3 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026495
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.3
Sample id Sample description nTPM
Hippocampus
nTPM: 40.9
2529 Female, age 94, left hemisphere 46.3
1911 Female, age 85, right hemisphere 43.8
2148 Female, age 91, left hemisphere 40.0
1898 Male, age 80, left hemisphere 38.8
2621 Female, age 67, right hemisphere 38.7
1855 Male, age 76, left hemisphere 37.9
Dentate gyrus
nTPM: 39.1
2530 Female, age 94, left hemisphere 43.7
2246 Female, age 85, both hemispheres 41.5
2528 Male, age 74, both hemispheres 41.3
1927 Female, age 91, both hemispheres 38.7
2531 Female, age 67, both hemispheres 35.4
2010 Male, age 76, both hemispheres 34.1
Entorhinal gyrus
nTPM: 42.1
2117 Female, age 91, right hemisphere 51.0
2686 Male, age 75, right hemisphere 47.9
1938 Female, age 85, left hemisphere 40.1
2613 Female, age 94, left hemisphere 39.5
1787 Male, age 76, left hemisphere 37.0
2764 Male, age 80, right hemisphere 37.0
Hippocampus, CA1
nTPM: 38.0
2527 Male, age 74, both hemispheres 44.0
2082 Female, age 91, right hemisphere 41.1
1873 Female, age 85, both hemispheres 40.0
2749 Male, age 80, left hemisphere 34.6
2045 Male, age 76, both hemispheres 30.3
Hippocampus, CA2
nTPM: 39.8
1963 Male, age 80, left hemisphere 43.8
2437 Female, age 94, left hemisphere 41.8
2113 Female, age 91, right hemisphere 40.9
1892 Male, age 76, both hemispheres 37.9
1940 Female, age 85, left hemisphere 37.4
2249 Male, age 74, both hemispheres 37.0
Hippocampus, CA3
nTPM: 36.7
1891 Female, age 85, both hemispheres 46.2
2436 Male, age 74, both hemispheres 37.1
1867 Male, age 76, both hemispheres 35.7
2137 Male, age 80, left hemisphere 34.9
2620 Female, age 94, left hemisphere 34.2
2861 Female, age 67, both hemispheres 32.2
Parahippocampal cortex
nTPM: 41.4
2692 Male, age 74, both hemispheres 51.1
1933 Female, age 85, both hemispheres 46.1
1850 Male, age 80, both hemispheres 43.6
2693 Female, age 94, both hemispheres 42.4
2532 Female, age 72, left hemisphere 42.3
1990 Female, age 91, right hemisphere 40.9
2622 Female, age 67, right hemisphere 40.2
2245 Female, age 91, both hemispheres 40.1
2250 Female, age 67, right hemisphere 35.2
2018 Male, age 76, both hemispheres 32.3
Perirhinal gyrus
nTPM: 38.7
2848 Male, age 76, right hemisphere 42.3
1794 Male, age 80, right hemisphere 39.3
1847 Female, age 91, left hemisphere 37.4
2521 Female, age 94, right hemisphere 37.4
1841 Female, age 85, right hemisphere 37.0
Subiculum
nTPM: 44.3
2438 Female, age 94, left hemisphere 48.9
1901 Male, age 80, both hemispheres 44.1
1977 Female, age 85, both hemispheres 43.7
2729 Female, age 91, right hemisphere 43.5
2619 Male, age 74, both hemispheres 43.3
2042 Male, age 76, both hemispheres 42.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 49.8
Min nTPM: 8.6
Std nTPM: 7.6
Median nTPM: 22.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 49.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 47.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 47.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 44.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 43.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 41.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 40.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 39.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 39.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.0
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 32.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.8
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 15.5
Sample A Female 18.2
Sample B Female 16.6
Sample C Male 15.5
Sample D Male 16.1
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.3
Sample A Female 18.9
Sample B Female 17.3
Sample C Male 17.6
Sample D Male 14.3
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 18.2
Min nTPM: 17.3
Sample A Female 17.9
Sample B Female 18.2
Sample C Male 17.3
Sample D Male 17.9
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 12.4
Sample A Female 18.1
Sample B Female 16.3
Sample C Male 12.4
Sample D Male 15.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.5
Sample A Male 7.8
Sample B Male 7.3
Sample C Female 6.9
Sample D Female 5.5
Hippocampal formation
nTPM: 7.3
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.4
Sample A Male 6.4
Sample B Male 8.0
Sample C Female 6.5
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
75774631 Antisense, RP_060530_01_A08, Mouse strain C57BL/6J (56 days, male) 4.4
75773702 Antisense, RP_060530_01_A08, Mouse strain C57BL/6J (56 days, male) 3.0

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