HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.4 nTPM
HPA Brain:153.0 nTPM
GTEx:43.4 nTPM
FANTOM5:132.2 Scaled Tags Per Million
Pig:372.6 nTPM
Mouse:117.6 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 153.0
Sample id Sample description nTPM
Hippocampus
nTPM: 119.0
2148 Female, age 91, left hemisphere 154.2
2621 Female, age 67, right hemisphere 139.1
1898 Male, age 80, left hemisphere 138.7
1855 Male, age 76, left hemisphere 108.1
1911 Female, age 85, right hemisphere 95.2
2529 Female, age 94, left hemisphere 78.4
Dentate gyrus
nTPM: 129.0
1927 Female, age 91, both hemispheres 183.3
2531 Female, age 67, both hemispheres 159.7
2530 Female, age 94, left hemisphere 123.1
2528 Male, age 74, both hemispheres 107.5
2010 Male, age 76, both hemispheres 100.9
2246 Female, age 85, both hemispheres 99.6
Entorhinal gyrus
nTPM: 128.1
2613 Female, age 94, left hemisphere 202.3
1938 Female, age 85, left hemisphere 134.3
1787 Male, age 76, left hemisphere 134.1
2764 Male, age 80, right hemisphere 128.3
2686 Male, age 75, right hemisphere 98.0
2117 Female, age 91, right hemisphere 71.3
Hippocampus, CA1
nTPM: 142.8
2749 Male, age 80, left hemisphere 230.8
2045 Male, age 76, both hemispheres 135.2
1873 Female, age 85, both hemispheres 121.4
2527 Male, age 74, both hemispheres 120.2
2082 Female, age 91, right hemisphere 106.2
Hippocampus, CA2
nTPM: 113.2
1892 Male, age 76, both hemispheres 136.7
1963 Male, age 80, left hemisphere 132.0
2437 Female, age 94, left hemisphere 114.4
2249 Male, age 74, both hemispheres 103.2
2113 Female, age 91, right hemisphere 98.2
1940 Female, age 85, left hemisphere 94.9
Hippocampus, CA3
nTPM: 144.4
2620 Female, age 94, left hemisphere 210.9
2137 Male, age 80, left hemisphere 192.1
2861 Female, age 67, both hemispheres 168.4
1867 Male, age 76, both hemispheres 105.4
2436 Male, age 74, both hemispheres 99.3
1891 Female, age 85, both hemispheres 90.4
Parahippocampal cortex
nTPM: 121.5
1850 Male, age 80, both hemispheres 141.2
2693 Female, age 94, both hemispheres 135.4
2250 Female, age 67, right hemisphere 133.5
2245 Female, age 91, both hemispheres 130.3
1990 Female, age 91, right hemisphere 127.9
1933 Female, age 85, both hemispheres 124.8
2622 Female, age 67, right hemisphere 124.1
2532 Female, age 72, left hemisphere 106.9
2692 Male, age 74, both hemispheres 104.6
2018 Male, age 76, both hemispheres 86.8
Perirhinal gyrus
nTPM: 153.0
1847 Female, age 91, left hemisphere 193.3
2521 Female, age 94, right hemisphere 157.6
1794 Male, age 80, right hemisphere 157.4
1841 Female, age 85, right hemisphere 138.7
2848 Male, age 76, right hemisphere 118.2
Subiculum
nTPM: 99.7
1977 Female, age 85, both hemispheres 112.9
2438 Female, age 94, left hemisphere 111.1
1901 Male, age 80, both hemispheres 110.3
2619 Male, age 74, both hemispheres 102.3
2729 Female, age 91, right hemisphere 91.5
2042 Male, age 76, both hemispheres 70.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 102.3
Min nTPM: 4.2
Std nTPM: 24.8
Median nTPM: 42.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 102.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 98.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 98.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 89.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 88.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 88.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 87.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 87.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 85.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 84.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.2
FF:10169-103B7 60 years, female 182.7
FF:10153-102I9 76 years, female 81.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 372.6
Pig sample Sample description nTPM
Subiculum
nTPM: 260.8
Samples: 4

Max nTPM: 380.1
Min nTPM: 207.2
Sample A Female 380.1
Sample B Female 222.6
Sample C Male 233.2
Sample D Male 207.2
Dorsal hippocampus
nTPM: 223.8
Samples: 4

Max nTPM: 251.8
Min nTPM: 179.6
Sample A Female 251.8
Sample B Female 250.0
Sample C Male 213.7
Sample D Male 179.6
Entorhinal cortex
nTPM: 372.6
Samples: 4

Max nTPM: 426.8
Min nTPM: 324.9
Sample A Female 426.8
Sample B Female 326.0
Sample C Male 412.8
Sample D Male 324.9
Ventral hippocampus
nTPM: 212.1
Samples: 4

Max nTPM: 284.3
Min nTPM: 158.6
Sample A Female 163.4
Sample B Female 158.6
Sample C Male 242.0
Sample D Male 284.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 117.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.7
Samples: 4

Max nTPM: 137.7
Min nTPM: 97.2
Sample A Male 109.9
Sample B Male 125.8
Sample C Female 97.2
Sample D Female 137.7
Hippocampal formation
nTPM: 100.0
Samples: 4

Max nTPM: 108.9
Min nTPM: 88.3
Sample A Male 95.8
Sample B Male 106.9
Sample C Female 108.9
Sample D Female 88.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
248 Antisense, RP_Baylor_102683, Mouse strain C57BL/6J (56 days, male) 8.1
247 Antisense, RP_Baylor_102683, Mouse strain C57BL/6J (56 days, male) 7.7

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