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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
278.2
nTPM
FANTOM5:
472.1
Scaled Tags Per Million
Pig:
238.8
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
278.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 73.6
2301
Female, age 85, both hemispheres
103.9
2188
Female, age 91, both hemispheres
73.1
2090
Male, age 80, both hemispheres
62.7
1984
Male, age 76, both hemispheres
54.7
Dorsal cochlear nucleus nTPM: 82.5
2187
Female, age 91, both hemispheres
124.2
2058
Male, age 76, both hemispheres
96.2
2370
Male, age 61, both hemispheres
92.4
2378
Male, age 80, both hemispheres
52.5
2802
Male, age 74, right hemisphere
47.3
Dorsal tegmental nucleus nTPM: 122.1
2358
Male, age 61, both hemispheres
163.4
2083
Male, age 80, both hemispheres
124.9
1936
Male, age 76, left hemisphere
108.0
2326
Male, age 74, both hemispheres
92.4
Dorsolateral tegmental area nTPM: 122.1
2141
Male, age 76, both hemispheres
160.4
2751
Female, age 85, both hemispheres
148.5
2360
Male, age 74, both hemispheres
109.7
2654
Male, age 80, both hemispheres
108.6
2337
Male, age 61, both hemispheres
83.5
Kolliker-Fuse nucleus nTPM: 129.1
2163
Male, age 80, both hemispheres
162.8
2793
Female, age 91, left hemisphere
128.2
2315
Male, age 76, right hemisphere
96.4
Lateral lemniscal nuclei nTPM: 144.4
2169
Male, age 76, both hemispheres
178.4
2453
Male, age 74, right hemisphere
169.8
2746
Female, age 85, left hemisphere
132.6
2320
Female, age 91, left hemisphere
123.0
2036
Male, age 80, both hemispheres
118.3
Lateral parabrachial nucleus nTPM: 106.9
2139
Female, age 85, right hemisphere
145.7
2013
Male, age 80, both hemispheres
103.1
2790
Male, age 61, both hemispheres
102.6
2792
Male, age 76, both hemispheres
76.1
Lateral vestibular nucleus nTPM: 123.3
2184
Male, age 76, both hemispheres
131.6
2311
Male, age 80, both hemispheres
115.1
Locus coeruleus nTPM: 278.2
2720
Male, age 74, both hemispheres
429.6
2123
Female, age 91, both hemispheres
357.3
1980
Male, age 76, both hemispheres
273.2
2014
Male, age 55, unknown
260.5
2162
Male, age 80, both hemispheres
233.0
2788
Male, age 74, unknown
201.6
2317
Female, age 72, unknown
192.6
Medial parabrachial nucleus nTPM: 131.2
2786
Male, age 76, both hemispheres
141.7
2156
Male, age 61, both hemispheres
137.5
2170
Female, age 91, both hemispheres
137.3
2854
Male, age 80, both hemispheres
125.3
2463
Female, age 85, right hemisphere
114.1
Medial periolivary nuclei nTPM: 109.4
2063
Male, age 76, both hemispheres
147.0
2171
Female, age 85, both hemispheres
143.5
2791
Male, age 74, right hemisphere
95.9
2458
Female, age 91, both hemispheres
95.7
2081
Male, age 80, both hemispheres
64.9
Motor facial nucleus nTPM: 136.7
2327
Male, age 80, both hemispheres
170.8
2062
Male, age 76, both hemispheres
163.9
2365
Male, age 74, right hemisphere
140.8
2697
Female, age 85, both hemispheres
140.5
2126
Male, age 61, both hemispheres
112.9
2795
Female, age 91, both hemispheres
91.2
Motor trigeminal nucleus nTPM: 120.4
2335
Male, age 61, both hemispheres
157.7
2309
Male, age 76, both hemispheres
127.9
2079
Male, age 80, both hemispheres
123.8
2560
Male, age 74, both hemispheres
98.4
2321
Female, age 91, both hemispheres
94.4
Nuclei of the trapezoid body nTPM: 139.9
2159
Male, age 61, both hemispheres
181.4
1983
Male, age 76, both hemispheres
156.9
2735
Female, age 85, both hemispheres
156.4
2166
Male, age 80, both hemispheres
108.4
2368
Female, age 91, both hemispheres
96.2
Nucleus raphe magnus nTPM: 165.6
2160
Male, age 61, both hemispheres
237.8
2455
Male, age 74, both hemispheres
202.9
2172
Female, age 85, both hemispheres
175.4
2328
Male, age 80, both hemispheres
149.8
2051
Male, age 76, both hemispheres
126.0
2459
Female, age 91, both hemispheres
102.0
Paramedian reticular nucleus nTPM: 135.9
2313
Male, age 61, both hemispheres
205.1
2057
Male, age 80, both hemispheres
134.5
2050
Female, age 85, both hemispheres
113.9
2052
Male, age 76, both hemispheres
90.0
Pedunculopontine tegmental nucleus nTPM: 168.4
1921
Female, age 85, both hemispheres
188.5
2334
Male, age 80, both hemispheres
175.8
2338
Male, age 61, both hemispheres
140.8
Pontine nuclei nTPM: 136.0
2727
Male, age 61, right hemisphere
202.4
2787
Female, age 85, both hemispheres
173.1
1863
Male, age 55, unknown
155.2
1968
Male, age 76, left hemisphere
148.5
2109
Female, age 72, unknown
134.7
2454
Male, age 74, left hemisphere
95.5
2115
Male, age 80, left hemisphere
90.9
2319
Female, age 91, both hemispheres
88.0
Pontine raphe nucleus nTPM: 157.3
2853
Male, age 76, midline
168.2
2122
Female, age 85, midline
146.5
Posteroventral cochlear nucleus nTPM: 84.6
2752
Female, age 85, both hemispheres
153.8
2070
Male, age 76, both hemispheres
121.9
2371
Male, age 61, both hemispheres
79.8
2341
Male, age 80, both hemispheres
42.4
2135
Female, age 91, both hemispheres
25.3
Principal sensory trigeminal nucleus nTPM: 146.8
2158
Male, age 61, both hemispheres
204.3
2324
Male, age 76, both hemispheres
142.8
2008
Male, age 80, left hemisphere
138.2
2367
Female, age 91, left hemisphere
101.7
Reticular pontine nucleus, caudal nTPM: 117.1
2332
Male, age 80, right hemisphere
175.8
2092
Male, age 76, both hemispheres
121.5
2457
Female, age 91, both hemispheres
91.2
2559
Male, age 74, both hemispheres
79.8
Reticular pontine nucleus, oral nTPM: 135.3
2167
Male, age 76, both hemispheres
144.7
1939
Male, age 80, both hemispheres
143.1
2012
Female, age 85, both hemispheres
142.5
2361
Male, age 74, both hemispheres
132.8
2366
Female, age 91, both hemispheres
113.1
Reticulotegmental nucleus nTPM: 126.2
2325
Male, age 76, both hemispheres
188.6
2322
Female, age 91, both hemispheres
113.9
2333
Male, age 80, both hemispheres
101.8
2452
Male, age 74, both hemispheres
100.5
Spinal trigeminal nucleus, oral nTPM: 146.5
2164
Male, age 80, both hemispheres
147.5
2737
Female, age 85, both hemispheres
146.9
1978
Male, age 76, both hemispheres
145.1
Subcoeruleus area nTPM: 158.7
2323
Female, age 91, left hemisphere
261.6
1958
Male, age 80, both hemispheres
164.2
2451
Male, age 74, both hemispheres
129.4
2089
Male, age 76, left hemisphere
128.6
2369
Female, age 85, left hemisphere
109.5
Superior olive nTPM: 130.8
1875
Female, age 85, both hemispheres
161.4
2329
Male, age 80, right hemisphere
127.2
2020
Male, age 76, both hemispheres
126.0
2364
Male, age 74, right hemisphere
125.3
2561
Female, age 91, both hemispheres
114.1
Ventral periolivary nuclei nTPM: 137.2
2165
Male, age 80, both hemispheres
152.9
2130
Female, age 85, both hemispheres
149.9
2794
Female, age 91, left hemisphere
129.7
2023
Male, age 76, both hemispheres
116.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 135.1
2449
Male, age 74, both hemispheres
186.3
2359
Male, age 61, both hemispheres
171.8
1959
Male, age 76, both hemispheres
140.5
2840
Female, age 85, both hemispheres
133.1
2161
Male, age 80, both hemispheres
116.5
2456
Female, age 91, both hemispheres
62.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
