HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Medium
RNA expressioni
Consensus:115.1 nTPM
HPA Brain:390.6 nTPM
GTEx:115.1 nTPM
FANTOM5:503.7 Scaled Tags Per Million
Pig:176.0 nTPM
Mouse:165.6 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA067773
Neuronal cells Medium
Glial cells Not detected
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067773
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 390.6
Sample id Sample description nTPM
Hippocampus
nTPM: 282.2
2621 Female, age 67, right hemisphere 365.1
2148 Female, age 91, left hemisphere 339.7
1898 Male, age 80, left hemisphere 274.0
1855 Male, age 76, left hemisphere 255.2
2529 Female, age 94, left hemisphere 232.4
1911 Female, age 85, right hemisphere 226.5
Dentate gyrus
nTPM: 311.7
1927 Female, age 91, both hemispheres 400.4
2530 Female, age 94, left hemisphere 381.5
2531 Female, age 67, both hemispheres 353.9
2528 Male, age 74, both hemispheres 262.4
2246 Female, age 85, both hemispheres 239.3
2010 Male, age 76, both hemispheres 232.3
Entorhinal gyrus
nTPM: 390.6
2613 Female, age 94, left hemisphere 632.7
2686 Male, age 75, right hemisphere 507.1
2764 Male, age 80, right hemisphere 356.2
1787 Male, age 76, left hemisphere 325.7
1938 Female, age 85, left hemisphere 313.7
2117 Female, age 91, right hemisphere 208.5
Hippocampus, CA1
nTPM: 322.3
2749 Male, age 80, left hemisphere 514.3
2527 Male, age 74, both hemispheres 365.5
2082 Female, age 91, right hemisphere 259.8
1873 Female, age 85, both hemispheres 257.0
2045 Male, age 76, both hemispheres 214.7
Hippocampus, CA2
nTPM: 281.3
2437 Female, age 94, left hemisphere 353.2
1892 Male, age 76, both hemispheres 318.2
2249 Male, age 74, both hemispheres 287.5
2113 Female, age 91, right hemisphere 271.0
1963 Male, age 80, left hemisphere 255.7
1940 Female, age 85, left hemisphere 202.0
Hippocampus, CA3
nTPM: 334.0
2620 Female, age 94, left hemisphere 470.9
2861 Female, age 67, both hemispheres 434.1
2137 Male, age 80, left hemisphere 410.5
1867 Male, age 76, both hemispheres 265.8
2436 Male, age 74, both hemispheres 245.7
1891 Female, age 85, both hemispheres 177.2
Parahippocampal cortex
nTPM: 358.8
2622 Female, age 67, right hemisphere 545.3
2245 Female, age 91, both hemispheres 474.3
2693 Female, age 94, both hemispheres 404.5
2692 Male, age 74, both hemispheres 389.7
1990 Female, age 91, right hemisphere 383.3
1850 Male, age 80, both hemispheres 307.4
2250 Female, age 67, right hemisphere 301.7
1933 Female, age 85, both hemispheres 272.4
2532 Female, age 72, left hemisphere 268.1
2018 Male, age 76, both hemispheres 240.9
Perirhinal gyrus
nTPM: 366.6
1847 Female, age 91, left hemisphere 488.6
2521 Female, age 94, right hemisphere 370.7
1794 Male, age 80, right hemisphere 363.4
2848 Male, age 76, right hemisphere 305.3
1841 Female, age 85, right hemisphere 305.2
Subiculum
nTPM: 263.7
2619 Male, age 74, both hemispheres 360.6
2438 Female, age 94, left hemisphere 278.8
1901 Male, age 80, both hemispheres 265.5
1977 Female, age 85, both hemispheres 262.0
2042 Male, age 76, both hemispheres 215.5
2729 Female, age 91, right hemisphere 199.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.1
Samples: 197

Max nTPM: 272.4
Min nTPM: 0.5
Std nTPM: 67.0
Median nTPM: 110.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 272.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 270.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 266.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 265.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 264.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 254.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 245.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 236.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 233.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 233.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 223.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 503.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 503.7
FF:10169-103B7 60 years, female 680.2
FF:10153-102I9 76 years, female 327.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 176.0
Pig sample Sample description nTPM
Subiculum
nTPM: 146.9
Samples: 4

Max nTPM: 212.8
Min nTPM: 105.3
Sample A Female 212.8
Sample B Female 116.8
Sample C Male 152.8
Sample D Male 105.3
Dorsal hippocampus
nTPM: 176.0
Samples: 4

Max nTPM: 225.6
Min nTPM: 127.2
Sample A Female 225.6
Sample B Female 217.4
Sample C Male 133.6
Sample D Male 127.2
Entorhinal cortex
nTPM: 176.0
Samples: 4

Max nTPM: 201.9
Min nTPM: 153.5
Sample A Female 201.9
Sample B Female 153.5
Sample C Male 186.4
Sample D Male 162.2
Ventral hippocampus
nTPM: 160.0
Samples: 4

Max nTPM: 215.7
Min nTPM: 101.0
Sample A Female 141.4
Sample B Female 101.0
Sample C Male 181.8
Sample D Male 215.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 165.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 150.6
Samples: 4

Max nTPM: 173.9
Min nTPM: 133.9
Sample A Male 150.3
Sample B Male 144.2
Sample C Female 133.9
Sample D Female 173.9
Hippocampal formation
nTPM: 165.6
Samples: 4

Max nTPM: 192.5
Min nTPM: 130.5
Sample A Male 130.5
Sample B Male 185.2
Sample C Female 192.5
Sample D Female 154.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
79556694 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 23.6
79632316 Antisense, RP_071204_01_C09, Mouse strain C57BL/6J (56 days, male) 23.6
1585 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 14.9
1586 Antisense, RP_040526_01_F03, Mouse strain C57BL/6J (56 days, male) 12.3

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