HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:414.1 nTPM
HPA Brain:139.9 nTPM
GTEx:414.1 nTPM
FANTOM5:160.2 Scaled Tags Per Million
Pig:78.0 nTPM
Mouse:200.2 nTPM
Allen mouse:13.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077218
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.9
Sample id Sample description nTPM
Hippocampus
nTPM: 66.1
1898 Male, age 80, left hemisphere 111.0
1855 Male, age 76, left hemisphere 82.6
2621 Female, age 67, right hemisphere 71.5
2148 Female, age 91, left hemisphere 52.8
2529 Female, age 94, left hemisphere 42.8
1911 Female, age 85, right hemisphere 36.0
Dentate gyrus
nTPM: 83.7
1927 Female, age 91, both hemispheres 137.0
2010 Male, age 76, both hemispheres 104.1
2530 Female, age 94, left hemisphere 86.5
2246 Female, age 85, both hemispheres 74.6
2531 Female, age 67, both hemispheres 54.0
2528 Male, age 74, both hemispheres 46.0
Entorhinal gyrus
nTPM: 87.4
1938 Female, age 85, left hemisphere 127.1
2764 Male, age 80, right hemisphere 110.5
2613 Female, age 94, left hemisphere 108.3
1787 Male, age 76, left hemisphere 88.3
2686 Male, age 75, right hemisphere 47.6
2117 Female, age 91, right hemisphere 42.6
Hippocampus, CA1
nTPM: 139.9
2749 Male, age 80, left hemisphere 268.4
2082 Female, age 91, right hemisphere 155.7
2045 Male, age 76, both hemispheres 124.2
1873 Female, age 85, both hemispheres 90.8
2527 Male, age 74, both hemispheres 60.6
Hippocampus, CA2
nTPM: 82.4
1963 Male, age 80, left hemisphere 163.5
1892 Male, age 76, both hemispheres 87.5
2113 Female, age 91, right hemisphere 73.5
1940 Female, age 85, left hemisphere 64.2
2437 Female, age 94, left hemisphere 63.0
2249 Male, age 74, both hemispheres 42.6
Hippocampus, CA3
nTPM: 77.2
2137 Male, age 80, left hemisphere 153.0
1867 Male, age 76, both hemispheres 89.0
2620 Female, age 94, left hemisphere 84.6
2861 Female, age 67, both hemispheres 54.8
1891 Female, age 85, both hemispheres 42.3
2436 Male, age 74, both hemispheres 39.6
Parahippocampal cortex
nTPM: 81.2
1933 Female, age 85, both hemispheres 149.7
1990 Female, age 91, right hemisphere 127.8
1850 Male, age 80, both hemispheres 103.4
2250 Female, age 67, right hemisphere 102.8
2245 Female, age 91, both hemispheres 70.2
2692 Male, age 74, both hemispheres 59.5
2622 Female, age 67, right hemisphere 57.9
2693 Female, age 94, both hemispheres 50.2
2018 Male, age 76, both hemispheres 45.5
2532 Female, age 72, left hemisphere 44.9
Perirhinal gyrus
nTPM: 117.8
1847 Female, age 91, left hemisphere 230.9
1841 Female, age 85, right hemisphere 122.9
1794 Male, age 80, right hemisphere 108.5
2521 Female, age 94, right hemisphere 71.4
2848 Male, age 76, right hemisphere 55.3
Subiculum
nTPM: 48.1
1901 Male, age 80, both hemispheres 68.7
1977 Female, age 85, both hemispheres 61.8
2042 Male, age 76, both hemispheres 51.7
2729 Female, age 91, right hemisphere 45.5
2619 Male, age 74, both hemispheres 34.5
2438 Female, age 94, left hemisphere 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 414.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 414.1
Samples: 197

Max nTPM: 1551.9
Min nTPM: 11.9
Std nTPM: 264.2
Median nTPM: 359.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1551.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1243.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1183.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 1134.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1069.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 989.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 982.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 969.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 937.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 926.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 910.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.2
FF:10169-103B7 60 years, female 208.7
FF:10153-102I9 76 years, female 111.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.0
Pig sample Sample description nTPM
Subiculum
nTPM: 78.0
Samples: 4

Max nTPM: 101.7
Min nTPM: 46.7
Sample A Female 101.7
Sample B Female 81.0
Sample C Male 82.7
Sample D Male 46.7
Dorsal hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 67.3
Min nTPM: 20.9
Sample A Female 60.5
Sample B Female 67.3
Sample C Male 65.9
Sample D Male 20.9
Entorhinal cortex
nTPM: 48.7
Samples: 4

Max nTPM: 72.6
Min nTPM: 40.3
Sample A Female 40.3
Sample B Female 41.2
Sample C Male 72.6
Sample D Male 40.5
Ventral hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 100.8
Min nTPM: 53.2
Sample A Female 61.7
Sample B Female 53.2
Sample C Male 100.8
Sample D Male 60.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 200.2
Samples: 4

Max nTPM: 222.0
Min nTPM: 161.9
Sample A Male 161.9
Sample B Male 222.0
Sample C Female 204.8
Sample D Female 212.1
Hippocampal formation
nTPM: 189.4
Samples: 4

Max nTPM: 230.4
Min nTPM: 132.4
Sample A Male 205.1
Sample B Male 189.5
Sample C Female 132.4
Sample D Female 230.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.3
70546093 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 13.3
71924388 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 12.5

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