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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
56.7
nTPM
HPA Brain:
60.1
nTPM
GTEx:
56.7
nTPM
FANTOM5:
26.5
Scaled Tags Per Million
Pig:
56.7
nTPM
Mouse:
23.1
nTPM
Allen mouse:
1.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
60.1
Sample id
Sample description
nTPM
Amygdala nTPM: 46.9
2517
Female, age 94, left hemisphere
54.7
2814
Male, age 76, right hemisphere
47.0
1987
Female, age 91, left hemisphere
46.1
2514
Male, age 75, right hemisphere
44.4
2695
Female, age 67, right hemisphere
42.4
Basal amygdala nTPM: 60.1
2827
Female, age 67, right hemisphere
77.4
2609
Male, age 75, right hemisphere
67.0
2685
Female, age 94, left hemisphere
58.3
2243
Female, age 91, right hemisphere
54.9
2110
Male, age 80, left hemisphere
52.4
1955
Male, age 76, both hemispheres
50.6
Central amygdala nTPM: 54.3
2826
Female, age 94, left hemisphere
77.7
1905
Male, age 76, both hemispheres
52.0
2515
Male, age 75, right hemisphere
51.3
2239
Male, age 80, left hemisphere
48.6
2701
Female, age 91, right hemisphere
41.9
Corticomedial amygdala nTPM: 51.2
2535
Female, age 67, right hemisphere
71.0
2829
Male, age 80, left hemisphere
58.1
2242
Female, age 91, right hemisphere
51.2
2428
Male, age 75, right hemisphere
50.5
2429
Female, age 94, left hemisphere
45.2
2240
Male, age 76, both hemispheres
31.4
Lateral amygdala nTPM: 55.5
2534
Female, age 94, left hemisphere
78.6
2256
Male, age 80, left hemisphere
59.4
2830
Female, age 67, right hemisphere
56.1
2516
Male, age 75, right hemisphere
48.2
1883
Male, age 76, both hemispheres
47.9
2255
Female, age 91, right hemisphere
43.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
56.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 56.7
Samples: 152
Max nTPM: 110.4
Min nTPM: 20.3
Std nTPM: 15.9
Median nTPM: 55.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
110.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
106.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
98.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
95.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
92.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
92.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
87.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
87.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
84.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
80.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
80.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
79.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
78.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
77.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
76.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
76.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
75.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
74.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
72.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
72.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
72.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
72.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
70.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
70.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
70.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
69.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
69.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
69.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
69.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
69.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
68.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
68.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
68.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
67.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
67.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
67.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
66.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
66.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
65.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
65.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
65.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
65.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
64.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
64.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
64.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
63.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
62.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
62.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
62.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
62.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
62.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
62.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
61.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
61.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
61.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
60.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
60.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
59.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
59.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
59.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
59.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
58.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
58.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
58.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
58.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
58.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
57.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
57.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
57.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
56.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
56.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
56.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
55.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
55.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
55.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
55.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
55.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
53.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
53.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
52.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
52.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
52.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
51.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
51.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
51.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
51.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
51.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
51.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
50.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
50.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
49.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
49.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
49.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
49.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
49.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
48.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
48.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
48.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
47.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
47.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
47.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
46.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
46.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
46.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
46.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
46.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
46.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
46.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
46.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
45.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
45.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
44.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
44.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
43.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
43.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
41.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
41.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
39.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
39.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
39.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
38.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
38.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
37.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
37.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
35.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
33.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
33.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
32.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
31.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
28.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
26.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
24.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
23.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 23.1
Samples: 4
Max nTPM: 26.7
Min nTPM: 18.7
Sample A
Male
24.3
Sample B
Male
18.7
Sample C
Female
26.7
Sample D
Female
22.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.