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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
146.4
nTPM
Monaco:
97.9
nTPM
Schmiedel:
201.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.4
HPA sample
nTPM
gdT-cell nTPM: 126.7
Samples: 6
Max nTPM: 164.7
Min nTPM: 88.8
P10809_1007
109.9
P10809_1022
151.4
P10809_1041
164.7
P10809_1060
88.8
P10809_1077
118.0
P10809_1098
127.6
MAIT T-cell nTPM: 129.7
Samples: 6
Max nTPM: 149.5
Min nTPM: 113.1
P10809_1006
131.9
P10809_1024
129.1
P10809_1043
115.5
P10809_1062
138.9
P10809_1083
113.1
P10809_1097
149.5
Memory CD4 T-cell nTPM: 112.1
Samples: 6
Max nTPM: 123.2
Min nTPM: 94.4
P10809_1014
105.2
P10809_1026
119.7
P10809_1045
123.2
P10809_1064
111.9
P10809_1086
94.4
P10809_1113
118.2
Memory CD8 T-cell nTPM: 106.3
Samples: 5
Max nTPM: 144.3
Min nTPM: 85.2
P10809_1012
111.4
P10809_1027
85.2
P10809_1046
144.3
P10809_1065
95.8
P10809_1111
94.8
Naive CD4 T-cell nTPM: 99.3
Samples: 6
Max nTPM: 112.5
Min nTPM: 79.3
P10809_1015
79.3
P10809_1030
97.8
P10809_1049
95.5
P10809_1068
104.8
P10809_1085
112.5
P10809_1112
105.8
Naive CD8 T-cell nTPM: 89.2
Samples: 6
Max nTPM: 102.5
Min nTPM: 76.8
P10809_1016
76.8
P10809_1031
88.8
P10809_1050
85.5
P10809_1069
102.5
P10809_1087
81.1
P10809_1110
100.4
T-reg nTPM: 146.4
Samples: 6
Max nTPM: 184.0
Min nTPM: 129.8
P10809_1018
129.8
P10809_1037
132.1
P10809_1056
142.5
P10809_1075
138.9
P10809_1094
184.0
P10809_1106
151.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.5
Samples: 4
Max nTPM: 115.6
Min nTPM: 60.9
RHH5202_R3573
77.6
RHH5230_R3602
115.6
RHH5259_R3631
60.9
RHH5288_R3660
95.7
Effector memory CD8 T-cell nTPM: 91.1
Samples: 4
Max nTPM: 124.1
Min nTPM: 57.0
RHH5203_R3574
89.5
RHH5231_R3603
93.9
RHH5260_R3632
57.0
RHH5289_R3661
124.1
MAIT T-cell nTPM: 93.7
Samples: 4
Max nTPM: 116.7
Min nTPM: 63.5
RHH5233_R3605
116.7
RHH5205_R3576
63.5
RHH5262_R3634
85.9
RHH5297_R3663
108.6
Memory CD4 T-cell TFH nTPM: 82.6
Samples: 4
Max nTPM: 103.3
Min nTPM: 70.3
RHH5300_R3666
70.3
RHH5236_R3608
103.3
RHH5265_R3637
80.3
RHH5208_R3579
76.4
Memory CD4 T-cell Th1 nTPM: 73.7
Samples: 4
Max nTPM: 96.6
Min nTPM: 56.3
RHH5210_R3581
82.8
RHH5302_R3668
96.6
RHH5238_R3610
56.3
RHH5267_R3639
59.0
Memory CD4 T-cell Th1/Th17 nTPM: 86.3
Samples: 4
Max nTPM: 117.4
Min nTPM: 50.8
RHH5303_R3669
107.1
RHH5211_R3582
117.4
RHH5239_R3611
50.8
RHH5268_R3640
69.7
Memory CD4 T-cell Th17 nTPM: 87.7
Samples: 4
Max nTPM: 99.1
Min nTPM: 63.2
RHH5304_R3670
99.1
RHH5212_R3583
98.5
RHH5240_R3612
90.1
RHH5269_R3641
63.2
Memory CD4 T-cell Th2 nTPM: 97.2
Samples: 4
Max nTPM: 113.1
Min nTPM: 85.8
RHH5305_R3671
86.4
RHH5213_R3584
103.4
RHH5241_R3613
113.1
RHH5270_R3642
85.8
Naive CD4 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 94.1
Min nTPM: 40.3
RHH5306_R3672
73.4
RHH5214_R3585
66.7
RHH5242_R3614
94.1
RHH5271_R3643
40.3
Naive CD8 T-cell nTPM: 54.5
Samples: 4
Max nTPM: 79.2
Min nTPM: 33.3
RHH5201_R3572
43.6
RHH5229_R3601
33.3
RHH5258_R3630
79.2
RHH5287_R3659
61.9
Non-Vd2 gdTCR nTPM: 93.8
Samples: 4
Max nTPM: 100.4
Min nTPM: 89.7
RHH5235_R3607
93.0
RHH5264_R3636
91.9
RHH5207_R3578
100.4
RHH5299_R3665
89.7
T-reg nTPM: 92.4
Samples: 4
Max nTPM: 117.3
Min nTPM: 78.8
RHH5301_R3667
91.0
RHH5237_R3609
117.3
RHH5266_R3638
82.6
RHH5209_R3580
78.8
Terminal effector memory CD4 T-cell nTPM: 83.1
Samples: 2
Max nTPM: 87.2
Min nTPM: 78.9
RHH5243_R3615
87.2
RHH5272_R3644
78.9
Terminal effector memory CD8 T-cell nTPM: 83.7
Samples: 4
Max nTPM: 104.6
Min nTPM: 63.7
RHH5232_R3604
102.5
RHH5204_R3575
63.9
RHH5261_R3633
63.7
RHH5296_R3662
104.6
Vd2 gdTCR nTPM: 98.0
Samples: 4
Max nTPM: 120.6
Min nTPM: 76.7
RHH5234_R3606
120.6
RHH5206_R3577
102.9
RHH5263_R3635
76.7
RHH5298_R3664
91.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
