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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
207.2
nTPM
Monaco:
278.8
nTPM
Schmiedel:
567.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
207.2
HPA sample
nTPM
gdT-cell nTPM: 115.1
Samples: 6
Max nTPM: 136.4
Min nTPM: 98.0
P10809_1007
109.0
P10809_1022
136.4
P10809_1041
117.2
P10809_1060
111.0
P10809_1077
98.0
P10809_1098
119.0
MAIT T-cell nTPM: 102.0
Samples: 6
Max nTPM: 125.6
Min nTPM: 82.0
P10809_1006
88.4
P10809_1024
117.7
P10809_1043
100.2
P10809_1062
98.1
P10809_1083
82.0
P10809_1097
125.6
Memory CD4 T-cell nTPM: 126.0
Samples: 6
Max nTPM: 148.6
Min nTPM: 103.6
P10809_1014
117.7
P10809_1026
148.6
P10809_1045
143.9
P10809_1064
109.3
P10809_1086
103.6
P10809_1113
132.6
Memory CD8 T-cell nTPM: 128.6
Samples: 5
Max nTPM: 150.4
Min nTPM: 111.4
P10809_1012
123.8
P10809_1027
150.4
P10809_1046
137.1
P10809_1065
111.4
P10809_1111
120.4
Naive CD4 T-cell nTPM: 87.7
Samples: 6
Max nTPM: 95.6
Min nTPM: 76.3
P10809_1015
95.1
P10809_1030
76.3
P10809_1049
95.6
P10809_1068
88.1
P10809_1085
77.5
P10809_1112
93.5
Naive CD8 T-cell nTPM: 101.9
Samples: 6
Max nTPM: 109.6
Min nTPM: 95.5
P10809_1016
109.6
P10809_1031
100.5
P10809_1050
108.0
P10809_1069
95.5
P10809_1087
101.3
P10809_1110
96.7
T-reg nTPM: 207.2
Samples: 6
Max nTPM: 240.5
Min nTPM: 174.1
P10809_1018
174.1
P10809_1037
189.0
P10809_1056
240.5
P10809_1075
192.7
P10809_1094
207.9
P10809_1106
238.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
278.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 189.9
Samples: 4
Max nTPM: 246.6
Min nTPM: 122.6
RHH5202_R3573
217.0
RHH5230_R3602
173.5
RHH5259_R3631
122.6
RHH5288_R3660
246.6
Effector memory CD8 T-cell nTPM: 220.5
Samples: 4
Max nTPM: 329.0
Min nTPM: 148.2
RHH5203_R3574
329.0
RHH5231_R3603
219.0
RHH5260_R3632
148.2
RHH5289_R3661
185.9
MAIT T-cell nTPM: 209.0
Samples: 4
Max nTPM: 235.9
Min nTPM: 145.4
RHH5233_R3605
228.5
RHH5205_R3576
145.4
RHH5262_R3634
235.9
RHH5297_R3663
226.3
Memory CD4 T-cell TFH nTPM: 278.9
Samples: 4
Max nTPM: 305.7
Min nTPM: 231.4
RHH5300_R3666
303.6
RHH5236_R3608
231.4
RHH5265_R3637
274.7
RHH5208_R3579
305.7
Memory CD4 T-cell Th1 nTPM: 216.7
Samples: 4
Max nTPM: 339.9
Min nTPM: 134.2
RHH5210_R3581
236.2
RHH5302_R3668
339.9
RHH5238_R3610
134.2
RHH5267_R3639
156.6
Memory CD4 T-cell Th1/Th17 nTPM: 214.1
Samples: 4
Max nTPM: 317.3
Min nTPM: 94.6
RHH5303_R3669
271.4
RHH5211_R3582
317.3
RHH5239_R3611
94.6
RHH5268_R3640
173.1
Memory CD4 T-cell Th17 nTPM: 183.3
Samples: 4
Max nTPM: 276.3
Min nTPM: 112.0
RHH5304_R3670
193.7
RHH5212_R3583
276.3
RHH5240_R3612
112.0
RHH5269_R3641
151.2
Memory CD4 T-cell Th2 nTPM: 257.4
Samples: 4
Max nTPM: 277.5
Min nTPM: 228.3
RHH5305_R3671
262.0
RHH5213_R3584
277.5
RHH5241_R3613
261.6
RHH5270_R3642
228.3
Naive CD4 T-cell nTPM: 175.1
Samples: 4
Max nTPM: 218.3
Min nTPM: 113.4
RHH5306_R3672
218.3
RHH5214_R3585
170.8
RHH5242_R3614
197.7
RHH5271_R3643
113.4
Naive CD8 T-cell nTPM: 144.4
Samples: 4
Max nTPM: 228.1
Min nTPM: 61.1
RHH5201_R3572
228.1
RHH5229_R3601
61.1
RHH5258_R3630
153.6
RHH5287_R3659
134.6
Non-Vd2 gdTCR nTPM: 256.5
Samples: 4
Max nTPM: 303.2
Min nTPM: 164.1
RHH5235_R3607
164.1
RHH5264_R3636
289.5
RHH5207_R3578
269.0
RHH5299_R3665
303.2
T-reg nTPM: 222.8
Samples: 4
Max nTPM: 292.5
Min nTPM: 187.4
RHH5301_R3667
292.5
RHH5237_R3609
210.2
RHH5266_R3638
187.4
RHH5209_R3580
201.0
Terminal effector memory CD4 T-cell nTPM: 212.2
Samples: 2
Max nTPM: 272.9
Min nTPM: 151.5
RHH5243_R3615
151.5
RHH5272_R3644
272.9
Terminal effector memory CD8 T-cell nTPM: 272.2
Samples: 4
Max nTPM: 342.4
Min nTPM: 142.5
RHH5232_R3604
324.7
RHH5204_R3575
342.4
RHH5261_R3633
142.5
RHH5296_R3662
279.2
Vd2 gdTCR nTPM: 222.6
Samples: 4
Max nTPM: 311.3
Min nTPM: 127.5
RHH5234_R3606
201.6
RHH5206_R3577
311.3
RHH5263_R3635
127.5
RHH5298_R3664
250.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.