HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.4 nTPM
HPA Brain:76.9 nTPM
GTEx:24.4 nTPM
FANTOM5:62.1 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:29.1 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.9
Sample id Sample description nTPM
Hippocampus
nTPM: 66.0
2621 Female, age 67, right hemisphere 86.2
2529 Female, age 94, left hemisphere 73.2
2148 Female, age 91, left hemisphere 69.5
1911 Female, age 85, right hemisphere 63.1
1855 Male, age 76, left hemisphere 53.1
1898 Male, age 80, left hemisphere 51.1
Dentate gyrus
nTPM: 60.6
2531 Female, age 67, both hemispheres 97.8
1927 Female, age 91, both hemispheres 65.5
2530 Female, age 94, left hemisphere 54.2
2246 Female, age 85, both hemispheres 52.3
2528 Male, age 74, both hemispheres 47.3
2010 Male, age 76, both hemispheres 46.5
Entorhinal gyrus
nTPM: 61.8
2613 Female, age 94, left hemisphere 80.5
2686 Male, age 75, right hemisphere 62.7
2764 Male, age 80, right hemisphere 61.1
2117 Female, age 91, right hemisphere 56.2
1938 Female, age 85, left hemisphere 56.0
1787 Male, age 76, left hemisphere 54.4
Hippocampus, CA1
nTPM: 64.1
2749 Male, age 80, left hemisphere 73.3
2082 Female, age 91, right hemisphere 71.2
2527 Male, age 74, both hemispheres 63.6
2045 Male, age 76, both hemispheres 62.4
1873 Female, age 85, both hemispheres 50.0
Hippocampus, CA2
nTPM: 55.6
2113 Female, age 91, right hemisphere 68.3
1940 Female, age 85, left hemisphere 58.9
2437 Female, age 94, left hemisphere 58.2
2249 Male, age 74, both hemispheres 49.7
1892 Male, age 76, both hemispheres 49.5
1963 Male, age 80, left hemisphere 49.1
Hippocampus, CA3
nTPM: 76.9
2861 Female, age 67, both hemispheres 109.6
2620 Female, age 94, left hemisphere 99.6
2137 Male, age 80, left hemisphere 89.8
2436 Male, age 74, both hemispheres 66.9
1867 Male, age 76, both hemispheres 51.9
1891 Female, age 85, both hemispheres 43.6
Parahippocampal cortex
nTPM: 59.4
2245 Female, age 91, both hemispheres 90.1
2622 Female, age 67, right hemisphere 75.3
2693 Female, age 94, both hemispheres 64.5
2250 Female, age 67, right hemisphere 56.1
1933 Female, age 85, both hemispheres 55.9
2532 Female, age 72, left hemisphere 53.5
1990 Female, age 91, right hemisphere 51.7
2018 Male, age 76, both hemispheres 50.6
1850 Male, age 80, both hemispheres 48.0
2692 Male, age 74, both hemispheres 47.8
Perirhinal gyrus
nTPM: 58.2
2521 Female, age 94, right hemisphere 67.8
1847 Female, age 91, left hemisphere 67.0
1794 Male, age 80, right hemisphere 58.8
2848 Male, age 76, right hemisphere 49.4
1841 Female, age 85, right hemisphere 48.2
Subiculum
nTPM: 51.6
1901 Male, age 80, both hemispheres 56.7
1977 Female, age 85, both hemispheres 54.3
2729 Female, age 91, right hemisphere 54.0
2619 Male, age 74, both hemispheres 50.7
2438 Female, age 94, left hemisphere 48.7
2042 Male, age 76, both hemispheres 45.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.4
Samples: 197

Max nTPM: 112.6
Min nTPM: 5.0
Std nTPM: 11.7
Median nTPM: 23.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 112.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 56.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 53.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 49.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 49.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 46.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 45.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 44.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 42.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.1
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 60.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.3
Pig sample Sample description nTPM
Subiculum
nTPM: 25.3
Samples: 4

Max nTPM: 31.8
Min nTPM: 21.0
Sample A Female 31.8
Sample B Female 21.0
Sample C Male 26.8
Sample D Male 21.4
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 19.4
Sample A Female 25.4
Sample B Female 25.0
Sample C Male 23.8
Sample D Male 19.4
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 27.6
Min nTPM: 21.4
Sample A Female 27.6
Sample B Female 21.4
Sample C Male 27.4
Sample D Male 24.2
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 34.0
Min nTPM: 17.5
Sample A Female 23.4
Sample B Female 17.5
Sample C Male 34.0
Sample D Male 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 33.4
Min nTPM: 26.0
Sample A Male 29.3
Sample B Male 27.5
Sample C Female 26.0
Sample D Female 33.4
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 24.9
Sample C Female 24.8
Sample D Female 25.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68845335 Antisense, RP_050224_01_F02, Mouse strain C57BL/6J (56 days, male) 1.4

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