HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:97.4 nTPM
GTEx:10.1 nTPM
FANTOM5:118.3 Scaled Tags Per Million
Pig:33.7 nTPM
Mouse:14.3 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.4
Sample id Sample description nTPM
Hippocampus
nTPM: 87.7
2148 Female, age 91, left hemisphere 94.3
2529 Female, age 94, left hemisphere 89.9
2621 Female, age 67, right hemisphere 89.5
1911 Female, age 85, right hemisphere 86.6
1898 Male, age 80, left hemisphere 83.3
1855 Male, age 76, left hemisphere 82.8
Dentate gyrus
nTPM: 90.0
2531 Female, age 67, both hemispheres 102.8
2246 Female, age 85, both hemispheres 94.4
1927 Female, age 91, both hemispheres 88.8
2530 Female, age 94, left hemisphere 88.3
2010 Male, age 76, both hemispheres 84.0
2528 Male, age 74, both hemispheres 81.5
Entorhinal gyrus
nTPM: 87.1
1938 Female, age 85, left hemisphere 93.4
1787 Male, age 76, left hemisphere 89.5
2764 Male, age 80, right hemisphere 89.4
2117 Female, age 91, right hemisphere 88.7
2686 Male, age 75, right hemisphere 81.8
2613 Female, age 94, left hemisphere 79.8
Hippocampus, CA1
nTPM: 88.5
2749 Male, age 80, left hemisphere 102.0
2527 Male, age 74, both hemispheres 89.7
2045 Male, age 76, both hemispheres 84.4
1873 Female, age 85, both hemispheres 83.8
2082 Female, age 91, right hemisphere 82.5
Hippocampus, CA2
nTPM: 86.6
2437 Female, age 94, left hemisphere 87.9
1963 Male, age 80, left hemisphere 87.4
2249 Male, age 74, both hemispheres 87.2
1940 Female, age 85, left hemisphere 86.6
2113 Female, age 91, right hemisphere 86.2
1892 Male, age 76, both hemispheres 84.6
Hippocampus, CA3
nTPM: 97.4
2620 Female, age 94, left hemisphere 114.2
2137 Male, age 80, left hemisphere 106.2
1891 Female, age 85, both hemispheres 97.4
2861 Female, age 67, both hemispheres 91.4
1867 Male, age 76, both hemispheres 88.7
2436 Male, age 74, both hemispheres 86.7
Parahippocampal cortex
nTPM: 91.1
2532 Female, age 72, left hemisphere 104.3
1850 Male, age 80, both hemispheres 95.0
2245 Female, age 91, both hemispheres 91.5
2693 Female, age 94, both hemispheres 91.4
2250 Female, age 67, right hemisphere 90.1
1933 Female, age 85, both hemispheres 89.9
2692 Male, age 74, both hemispheres 89.8
2622 Female, age 67, right hemisphere 89.4
1990 Female, age 91, right hemisphere 86.7
2018 Male, age 76, both hemispheres 83.0
Perirhinal gyrus
nTPM: 95.7
1794 Male, age 80, right hemisphere 100.7
2521 Female, age 94, right hemisphere 100.1
1841 Female, age 85, right hemisphere 98.2
2848 Male, age 76, right hemisphere 90.1
1847 Female, age 91, left hemisphere 89.5
Subiculum
nTPM: 96.1
2438 Female, age 94, left hemisphere 102.6
1977 Female, age 85, both hemispheres 100.6
1901 Male, age 80, both hemispheres 98.7
2042 Male, age 76, both hemispheres 97.8
2619 Male, age 74, both hemispheres 90.8
2729 Female, age 91, right hemisphere 85.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 23.8
Min nTPM: 5.2
Std nTPM: 2.9
Median nTPM: 9.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 20.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 16.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 14.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 14.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 14.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 14.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 118.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 118.3
FF:10169-103B7 60 years, female 131.8
FF:10153-102I9 76 years, female 104.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.7
Pig sample Sample description nTPM
Subiculum
nTPM: 31.0
Samples: 4

Max nTPM: 35.1
Min nTPM: 29.2
Sample A Female 35.1
Sample B Female 29.2
Sample C Male 30.2
Sample D Male 29.5
Dorsal hippocampus
nTPM: 33.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 29.6
Sample A Female 36.1
Sample B Female 32.9
Sample C Male 36.2
Sample D Male 29.6
Entorhinal cortex
nTPM: 31.5
Samples: 4

Max nTPM: 34.8
Min nTPM: 29.5
Sample A Female 34.8
Sample B Female 32.1
Sample C Male 29.6
Sample D Male 29.5
Ventral hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 34.0
Min nTPM: 28.0
Sample A Female 29.6
Sample B Female 28.0
Sample C Male 29.6
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.5
Sample A Male 14.3
Sample B Male 13.9
Sample C Female 12.5
Sample D Female 16.3
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.4
Sample A Male 11.4
Sample B Male 13.8
Sample C Female 13.5
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
70228627 Antisense, RP_050524_04_B01, Mouse strain C57BL/6J (56 days, male) 9.0

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