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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.0
nTPM
Monaco:
131.6
nTPM
Schmiedel:
110.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.0
HPA sample
nTPM
gdT-cell nTPM: 63.1
Samples: 6
Max nTPM: 101.2
Min nTPM: 36.7
P10809_1007
40.2
P10809_1022
77.1
P10809_1041
101.2
P10809_1060
70.5
P10809_1077
36.7
P10809_1098
52.9
MAIT T-cell nTPM: 68.0
Samples: 6
Max nTPM: 82.9
Min nTPM: 45.3
P10809_1006
61.3
P10809_1024
77.9
P10809_1043
82.9
P10809_1062
61.8
P10809_1083
45.3
P10809_1097
78.6
Memory CD4 T-cell nTPM: 52.6
Samples: 6
Max nTPM: 80.5
Min nTPM: 42.2
P10809_1014
49.4
P10809_1026
54.9
P10809_1045
80.5
P10809_1064
43.8
P10809_1086
42.2
P10809_1113
44.9
Memory CD8 T-cell nTPM: 62.0
Samples: 5
Max nTPM: 83.1
Min nTPM: 48.1
P10809_1012
59.9
P10809_1027
48.1
P10809_1046
83.1
P10809_1065
65.4
P10809_1111
53.4
Naive CD4 T-cell nTPM: 37.2
Samples: 6
Max nTPM: 45.1
Min nTPM: 26.9
P10809_1015
32.2
P10809_1030
45.1
P10809_1049
42.9
P10809_1068
38.4
P10809_1085
26.9
P10809_1112
37.5
Naive CD8 T-cell nTPM: 43.6
Samples: 6
Max nTPM: 65.3
Min nTPM: 30.9
P10809_1016
33.3
P10809_1031
65.3
P10809_1050
42.9
P10809_1069
57.4
P10809_1087
30.9
P10809_1110
31.9
T-reg nTPM: 32.2
Samples: 6
Max nTPM: 72.1
Min nTPM: 10.7
P10809_1018
30.1
P10809_1037
42.8
P10809_1056
72.1
P10809_1075
23.7
P10809_1094
13.9
P10809_1106
10.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 143.8
Min nTPM: 55.3
RHH5202_R3573
143.8
RHH5230_R3602
83.1
RHH5259_R3631
55.3
RHH5288_R3660
86.1
Effector memory CD8 T-cell nTPM: 101.3
Samples: 4
Max nTPM: 154.2
Min nTPM: 73.7
RHH5203_R3574
154.2
RHH5231_R3603
92.2
RHH5260_R3632
85.2
RHH5289_R3661
73.7
MAIT T-cell nTPM: 95.9
Samples: 4
Max nTPM: 108.2
Min nTPM: 84.2
RHH5233_R3605
102.2
RHH5205_R3576
84.2
RHH5262_R3634
108.2
RHH5297_R3663
89.0
Memory CD4 T-cell TFH nTPM: 89.4
Samples: 4
Max nTPM: 117.2
Min nTPM: 52.9
RHH5300_R3666
90.1
RHH5236_R3608
97.3
RHH5265_R3637
52.9
RHH5208_R3579
117.2
Memory CD4 T-cell Th1 nTPM: 67.4
Samples: 4
Max nTPM: 79.1
Min nTPM: 56.8
RHH5210_R3581
76.3
RHH5302_R3668
79.1
RHH5238_R3610
56.8
RHH5267_R3639
57.4
Memory CD4 T-cell Th1/Th17 nTPM: 86.3
Samples: 4
Max nTPM: 144.0
Min nTPM: 39.7
RHH5303_R3669
97.3
RHH5211_R3582
144.0
RHH5239_R3611
39.7
RHH5268_R3640
64.2
Memory CD4 T-cell Th17 nTPM: 79.2
Samples: 4
Max nTPM: 91.2
Min nTPM: 67.8
RHH5304_R3670
91.2
RHH5212_R3583
84.7
RHH5240_R3612
67.8
RHH5269_R3641
73.2
Memory CD4 T-cell Th2 nTPM: 83.2
Samples: 4
Max nTPM: 131.3
Min nTPM: 62.1
RHH5305_R3671
67.4
RHH5213_R3584
131.3
RHH5241_R3613
62.1
RHH5270_R3642
71.8
Naive CD4 T-cell nTPM: 53.9
Samples: 4
Max nTPM: 86.0
Min nTPM: 30.7
RHH5306_R3672
56.1
RHH5214_R3585
86.0
RHH5242_R3614
42.7
RHH5271_R3643
30.7
Naive CD8 T-cell nTPM: 64.9
Samples: 4
Max nTPM: 125.1
Min nTPM: 28.4
RHH5201_R3572
125.1
RHH5229_R3601
28.4
RHH5258_R3630
55.3
RHH5287_R3659
50.8
Non-Vd2 gdTCR nTPM: 91.4
Samples: 4
Max nTPM: 117.0
Min nTPM: 59.2
RHH5235_R3607
91.9
RHH5264_R3636
97.4
RHH5207_R3578
117.0
RHH5299_R3665
59.2
T-reg nTPM: 111.4
Samples: 4
Max nTPM: 163.4
Min nTPM: 83.0
RHH5301_R3667
94.2
RHH5237_R3609
104.9
RHH5266_R3638
83.0
RHH5209_R3580
163.4
Terminal effector memory CD4 T-cell nTPM: 97.9
Samples: 2
Max nTPM: 105.4
Min nTPM: 90.3
RHH5243_R3615
90.3
RHH5272_R3644
105.4
Terminal effector memory CD8 T-cell nTPM: 85.4
Samples: 4
Max nTPM: 114.5
Min nTPM: 55.8
RHH5232_R3604
114.5
RHH5204_R3575
71.5
RHH5261_R3633
99.6
RHH5296_R3662
55.8
Vd2 gdTCR nTPM: 131.6
Samples: 4
Max nTPM: 185.8
Min nTPM: 103.0
RHH5234_R3606
122.8
RHH5206_R3577
185.8
RHH5263_R3635
103.0
RHH5298_R3664
114.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
