HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:94.0 nTPM
HPA Brain:205.9 nTPM
GTEx:94.0 nTPM
FANTOM5:59.4 Scaled Tags Per Million
Pig:142.7 nTPM
Mouse:188.5 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014662
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 205.9
Sample id Sample description nTPM
Hippocampus
nTPM: 185.8
1898 Male, age 80, left hemisphere 256.4
1855 Male, age 76, left hemisphere 235.7
2621 Female, age 67, right hemisphere 210.4
2148 Female, age 91, left hemisphere 184.4
1911 Female, age 85, right hemisphere 120.7
2529 Female, age 94, left hemisphere 106.9
Dentate gyrus
nTPM: 205.9
2530 Female, age 94, left hemisphere 295.9
1927 Female, age 91, both hemispheres 246.0
2010 Male, age 76, both hemispheres 239.0
2531 Female, age 67, both hemispheres 167.5
2246 Female, age 85, both hemispheres 145.6
2528 Male, age 74, both hemispheres 141.5
Entorhinal gyrus
nTPM: 188.0
2613 Female, age 94, left hemisphere 278.1
2764 Male, age 80, right hemisphere 220.1
1938 Female, age 85, left hemisphere 212.0
2686 Male, age 75, right hemisphere 165.6
1787 Male, age 76, left hemisphere 157.1
2117 Female, age 91, right hemisphere 94.9
Hippocampus, CA1
nTPM: 194.0
2749 Male, age 80, left hemisphere 344.6
1873 Female, age 85, both hemispheres 233.2
2045 Male, age 76, both hemispheres 146.5
2527 Male, age 74, both hemispheres 143.2
2082 Female, age 91, right hemisphere 102.4
Hippocampus, CA2
nTPM: 171.7
1963 Male, age 80, left hemisphere 276.2
1892 Male, age 76, both hemispheres 229.4
2437 Female, age 94, left hemisphere 181.1
1940 Female, age 85, left hemisphere 118.9
2113 Female, age 91, right hemisphere 116.3
2249 Male, age 74, both hemispheres 108.0
Hippocampus, CA3
nTPM: 167.1
2861 Female, age 67, both hemispheres 294.2
2137 Male, age 80, left hemisphere 196.6
2620 Female, age 94, left hemisphere 167.6
1867 Male, age 76, both hemispheres 130.1
2436 Male, age 74, both hemispheres 112.8
1891 Female, age 85, both hemispheres 101.3
Parahippocampal cortex
nTPM: 164.1
2245 Female, age 91, both hemispheres 199.5
2622 Female, age 67, right hemisphere 198.8
1933 Female, age 85, both hemispheres 195.6
1850 Male, age 80, both hemispheres 181.0
1990 Female, age 91, right hemisphere 161.0
2693 Female, age 94, both hemispheres 159.8
2692 Male, age 74, both hemispheres 159.3
2532 Female, age 72, left hemisphere 144.9
2250 Female, age 67, right hemisphere 128.3
2018 Male, age 76, both hemispheres 112.5
Perirhinal gyrus
nTPM: 176.8
1847 Female, age 91, left hemisphere 235.5
1794 Male, age 80, right hemisphere 191.5
1841 Female, age 85, right hemisphere 157.3
2848 Male, age 76, right hemisphere 150.7
2521 Female, age 94, right hemisphere 149.0
Subiculum
nTPM: 120.0
1977 Female, age 85, both hemispheres 145.1
1901 Male, age 80, both hemispheres 128.7
2438 Female, age 94, left hemisphere 119.8
2619 Male, age 74, both hemispheres 119.6
2729 Female, age 91, right hemisphere 113.9
2042 Male, age 76, both hemispheres 92.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.0
Samples: 197

Max nTPM: 397.5
Min nTPM: 7.4
Std nTPM: 63.5
Median nTPM: 88.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 397.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 309.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 281.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 260.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 257.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 252.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 233.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 228.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 223.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 209.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 208.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.4
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 45.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 142.7
Pig sample Sample description nTPM
Subiculum
nTPM: 127.2
Samples: 4

Max nTPM: 160.5
Min nTPM: 96.2
Sample A Female 160.5
Sample B Female 113.3
Sample C Male 138.7
Sample D Male 96.2
Dorsal hippocampus
nTPM: 122.2
Samples: 4

Max nTPM: 182.9
Min nTPM: 81.0
Sample A Female 182.9
Sample B Female 136.0
Sample C Male 89.0
Sample D Male 81.0
Entorhinal cortex
nTPM: 98.0
Samples: 4

Max nTPM: 117.4
Min nTPM: 86.0
Sample A Female 98.0
Sample B Female 86.0
Sample C Male 117.4
Sample D Male 90.5
Ventral hippocampus
nTPM: 142.7
Samples: 4

Max nTPM: 186.4
Min nTPM: 99.4
Sample A Female 169.6
Sample B Female 99.4
Sample C Male 186.4
Sample D Male 115.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 188.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 166.6
Samples: 4

Max nTPM: 219.6
Min nTPM: 143.7
Sample A Male 143.7
Sample B Male 152.8
Sample C Female 150.4
Sample D Female 219.6
Hippocampal formation
nTPM: 188.5
Samples: 4

Max nTPM: 206.7
Min nTPM: 175.0
Sample A Male 175.0
Sample B Male 190.4
Sample C Female 206.7
Sample D Female 182.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
1640 Antisense, RP_040507_01_G11, Mouse strain C57BL/6J (56 days, male) 6.1
1639 Antisense, RP_040507_01_G11, Mouse strain C57BL/6J (56 days, male) 5.6

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