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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
10192.8
nTPM
Monaco:
1368.1
nTPM
Schmiedel:
2079.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10192.8
HPA sample
nTPM
gdT-cell nTPM: 4415.3
Samples: 6
Max nTPM: 5453.9
Min nTPM: 3083.9
P10809_1007
5453.9
P10809_1022
4676.1
P10809_1041
4854.8
P10809_1060
3083.9
P10809_1077
3939.9
P10809_1098
4483.0
MAIT T-cell nTPM: 6223.7
Samples: 6
Max nTPM: 7651.9
Min nTPM: 4731.3
P10809_1006
5961.7
P10809_1024
6067.9
P10809_1043
6681.1
P10809_1062
6248.4
P10809_1083
4731.3
P10809_1097
7651.9
Memory CD4 T-cell nTPM: 8324.7
Samples: 6
Max nTPM: 11338.9
Min nTPM: 5411.9
P10809_1014
9110.7
P10809_1026
11338.9
P10809_1045
9622.0
P10809_1064
5959.0
P10809_1086
5411.9
P10809_1113
8505.5
Memory CD8 T-cell nTPM: 6327.2
Samples: 5
Max nTPM: 7337.0
Min nTPM: 4749.5
P10809_1012
6759.4
P10809_1027
6551.2
P10809_1046
7337.0
P10809_1065
4749.5
P10809_1111
6239.1
Naive CD4 T-cell nTPM: 10192.9
Samples: 6
Max nTPM: 12258.9
Min nTPM: 7310.8
P10809_1015
11659.4
P10809_1030
12258.9
P10809_1049
9787.0
P10809_1068
9710.2
P10809_1085
7310.8
P10809_1112
10430.8
Naive CD8 T-cell nTPM: 8112.3
Samples: 6
Max nTPM: 13992.0
Min nTPM: 3877.5
P10809_1016
13992.0
P10809_1031
8202.7
P10809_1050
7714.3
P10809_1069
6474.5
P10809_1087
3877.5
P10809_1110
8412.9
T-reg nTPM: 5157.2
Samples: 6
Max nTPM: 6010.3
Min nTPM: 4593.3
P10809_1018
4693.8
P10809_1037
4993.4
P10809_1056
6010.3
P10809_1075
4593.3
P10809_1094
5404.9
P10809_1106
5247.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1368.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1009.8
Samples: 4
Max nTPM: 1693.8
Min nTPM: 400.0
RHH5202_R3573
400.0
RHH5230_R3602
1294.6
RHH5259_R3631
1693.8
RHH5288_R3660
650.6
Effector memory CD8 T-cell nTPM: 316.6
Samples: 4
Max nTPM: 610.4
Min nTPM: 202.9
RHH5203_R3574
219.2
RHH5231_R3603
202.9
RHH5260_R3632
610.4
RHH5289_R3661
233.9
MAIT T-cell nTPM: 655.0
Samples: 4
Max nTPM: 878.8
Min nTPM: 343.8
RHH5233_R3605
343.8
RHH5205_R3576
878.8
RHH5262_R3634
813.3
RHH5297_R3663
584.2
Memory CD4 T-cell TFH nTPM: 515.0
Samples: 4
Max nTPM: 611.4
Min nTPM: 403.9
RHH5300_R3666
606.7
RHH5236_R3608
438.0
RHH5265_R3637
611.4
RHH5208_R3579
403.9
Memory CD4 T-cell Th1 nTPM: 1211.7
Samples: 4
Max nTPM: 2205.9
Min nTPM: 444.4
RHH5210_R3581
444.4
RHH5302_R3668
881.2
RHH5238_R3610
2205.9
RHH5267_R3639
1315.1
Memory CD4 T-cell Th1/Th17 nTPM: 862.2
Samples: 4
Max nTPM: 1313.2
Min nTPM: 451.7
RHH5303_R3669
488.3
RHH5211_R3582
451.7
RHH5239_R3611
1195.7
RHH5268_R3640
1313.2
Memory CD4 T-cell Th17 nTPM: 883.1
Samples: 4
Max nTPM: 1213.6
Min nTPM: 509.6
RHH5304_R3670
1213.6
RHH5212_R3583
509.6
RHH5240_R3612
908.1
RHH5269_R3641
900.9
Memory CD4 T-cell Th2 nTPM: 1013.7
Samples: 4
Max nTPM: 1662.2
Min nTPM: 695.8
RHH5305_R3671
1662.2
RHH5213_R3584
695.8
RHH5241_R3613
738.1
RHH5270_R3642
958.5
Naive CD4 T-cell nTPM: 1368.1
Samples: 4
Max nTPM: 1968.6
Min nTPM: 990.3
RHH5306_R3672
1968.6
RHH5214_R3585
1055.4
RHH5242_R3614
990.3
RHH5271_R3643
1458.0
Naive CD8 T-cell nTPM: 1190.5
Samples: 4
Max nTPM: 1816.9
Min nTPM: 555.7
RHH5201_R3572
555.7
RHH5229_R3601
1816.9
RHH5258_R3630
764.6
RHH5287_R3659
1624.6
Non-Vd2 gdTCR nTPM: 453.2
Samples: 4
Max nTPM: 832.1
Min nTPM: 251.0
RHH5235_R3607
832.1
RHH5264_R3636
251.0
RHH5207_R3578
326.7
RHH5299_R3665
403.1
T-reg nTPM: 742.4
Samples: 4
Max nTPM: 1117.5
Min nTPM: 304.9
RHH5301_R3667
812.5
RHH5237_R3609
304.9
RHH5266_R3638
1117.5
RHH5209_R3580
734.7
Terminal effector memory CD4 T-cell nTPM: 571.2
Samples: 2
Max nTPM: 787.7
Min nTPM: 354.7
RHH5243_R3615
787.7
RHH5272_R3644
354.7
Terminal effector memory CD8 T-cell nTPM: 497.6
Samples: 4
Max nTPM: 763.6
Min nTPM: 209.4
RHH5232_R3604
209.4
RHH5204_R3575
652.9
RHH5261_R3633
763.6
RHH5296_R3662
364.5
Vd2 gdTCR nTPM: 912.1
Samples: 4
Max nTPM: 1342.7
Min nTPM: 575.9
RHH5234_R3606
575.9
RHH5206_R3577
1342.7
RHH5263_R3635
962.3
RHH5298_R3664
767.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.