HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.9 nTPM
HPA Brain:143.4 nTPM
GTEx:20.9 nTPM
FANTOM5:17.2 Scaled Tags Per Million
Pig:67.2 nTPM
Mouse:136.9 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 143.4
Sample id Sample description nTPM
Hippocampus
nTPM: 121.6
1855 Male, age 76, left hemisphere 152.8
2148 Female, age 91, left hemisphere 149.0
2621 Female, age 67, right hemisphere 146.3
1898 Male, age 80, left hemisphere 115.8
1911 Female, age 85, right hemisphere 92.0
2529 Female, age 94, left hemisphere 73.8
Dentate gyrus
nTPM: 131.3
2531 Female, age 67, both hemispheres 177.7
1927 Female, age 91, both hemispheres 170.0
2010 Male, age 76, both hemispheres 135.4
2246 Female, age 85, both hemispheres 106.6
2530 Female, age 94, left hemisphere 102.5
2528 Male, age 74, both hemispheres 95.8
Entorhinal gyrus
nTPM: 84.6
2613 Female, age 94, left hemisphere 101.2
1787 Male, age 76, left hemisphere 100.7
2764 Male, age 80, right hemisphere 94.8
1938 Female, age 85, left hemisphere 87.7
2686 Male, age 75, right hemisphere 64.2
2117 Female, age 91, right hemisphere 59.2
Hippocampus, CA1
nTPM: 143.4
2749 Male, age 80, left hemisphere 208.5
2045 Male, age 76, both hemispheres 181.8
1873 Female, age 85, both hemispheres 127.8
2527 Male, age 74, both hemispheres 107.7
2082 Female, age 91, right hemisphere 91.4
Hippocampus, CA2
nTPM: 100.8
1963 Male, age 80, left hemisphere 147.2
1892 Male, age 76, both hemispheres 133.4
2113 Female, age 91, right hemisphere 90.4
1940 Female, age 85, left hemisphere 88.1
2249 Male, age 74, both hemispheres 78.2
2437 Female, age 94, left hemisphere 67.6
Hippocampus, CA3
nTPM: 133.2
2620 Female, age 94, left hemisphere 221.4
2861 Female, age 67, both hemispheres 168.1
2137 Male, age 80, left hemisphere 160.7
1867 Male, age 76, both hemispheres 92.8
2436 Male, age 74, both hemispheres 79.0
1891 Female, age 85, both hemispheres 77.0
Parahippocampal cortex
nTPM: 91.1
2245 Female, age 91, both hemispheres 117.2
1850 Male, age 80, both hemispheres 101.2
2250 Female, age 67, right hemisphere 101.0
2693 Female, age 94, both hemispheres 99.8
1933 Female, age 85, both hemispheres 97.2
2018 Male, age 76, both hemispheres 96.2
2532 Female, age 72, left hemisphere 84.3
2622 Female, age 67, right hemisphere 81.9
1990 Female, age 91, right hemisphere 77.5
2692 Male, age 74, both hemispheres 55.2
Perirhinal gyrus
nTPM: 113.9
2521 Female, age 94, right hemisphere 136.5
1847 Female, age 91, left hemisphere 131.9
1794 Male, age 80, right hemisphere 113.7
2848 Male, age 76, right hemisphere 98.3
1841 Female, age 85, right hemisphere 89.3
Subiculum
nTPM: 71.6
2729 Female, age 91, right hemisphere 90.1
1901 Male, age 80, both hemispheres 83.8
1977 Female, age 85, both hemispheres 77.1
2042 Male, age 76, both hemispheres 77.1
2619 Male, age 74, both hemispheres 52.8
2438 Female, age 94, left hemisphere 48.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 85.3
Min nTPM: 4.0
Std nTPM: 13.7
Median nTPM: 17.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 85.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 75.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 61.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 59.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 56.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 56.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 53.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 48.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 48.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 45.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.2
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.2
Pig sample Sample description nTPM
Subiculum
nTPM: 40.8
Samples: 4

Max nTPM: 51.4
Min nTPM: 35.8
Sample A Female 51.4
Sample B Female 37.4
Sample C Male 38.7
Sample D Male 35.8
Dorsal hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 84.2
Min nTPM: 35.6
Sample A Female 80.5
Sample B Female 84.2
Sample C Male 35.6
Sample D Male 68.2
Entorhinal cortex
nTPM: 54.0
Samples: 4

Max nTPM: 60.5
Min nTPM: 46.8
Sample A Female 60.5
Sample B Female 53.8
Sample C Male 54.7
Sample D Male 46.8
Ventral hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 77.1
Min nTPM: 41.6
Sample A Female 51.1
Sample B Female 41.6
Sample C Male 55.1
Sample D Male 77.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.5
Samples: 4

Max nTPM: 109.0
Min nTPM: 93.2
Sample A Male 95.5
Sample B Male 93.2
Sample C Female 100.1
Sample D Female 109.0
Hippocampal formation
nTPM: 136.9
Samples: 4

Max nTPM: 161.6
Min nTPM: 118.2
Sample A Male 118.2
Sample B Male 138.9
Sample C Female 161.6
Sample D Female 128.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
70300756 Antisense, RP_050607_02_C09, Mouse strain C57BL/6J (56 days, male) 17.9
73931642 Antisense, RP_051214_04_B10, Mouse strain C57BL/6J (56 days, male) 12.2

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