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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
186.1
nTPM
Monaco:
203.0
nTPM
Schmiedel:
44.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
186.1
HPA sample
nTPM
gdT-cell nTPM: 186.1
Samples: 6
Max nTPM: 355.9
Min nTPM: 106.5
P10809_1007
106.5
P10809_1022
192.6
P10809_1041
355.9
P10809_1060
115.6
P10809_1077
166.6
P10809_1098
179.5
MAIT T-cell nTPM: 90.6
Samples: 6
Max nTPM: 144.5
Min nTPM: 49.9
P10809_1006
49.9
P10809_1024
73.1
P10809_1043
144.5
P10809_1062
68.8
P10809_1083
99.0
P10809_1097
108.2
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 98.0
Min nTPM: 34.0
P10809_1014
34.0
P10809_1026
49.6
P10809_1045
73.4
P10809_1064
95.6
P10809_1086
98.0
P10809_1113
51.7
Memory CD8 T-cell nTPM: 109.8
Samples: 5
Max nTPM: 204.4
Min nTPM: 41.5
P10809_1012
41.5
P10809_1027
95.9
P10809_1046
204.4
P10809_1065
117.3
P10809_1111
90.1
Naive CD4 T-cell nTPM: 72.3
Samples: 6
Max nTPM: 134.1
Min nTPM: 33.3
P10809_1015
33.3
P10809_1030
57.7
P10809_1049
134.1
P10809_1068
63.7
P10809_1085
83.3
P10809_1112
61.7
Naive CD8 T-cell nTPM: 93.7
Samples: 6
Max nTPM: 142.8
Min nTPM: 25.6
P10809_1016
25.6
P10809_1031
55.1
P10809_1050
140.8
P10809_1069
123.2
P10809_1087
142.8
P10809_1110
74.9
T-reg nTPM: 91.1
Samples: 6
Max nTPM: 158.6
Min nTPM: 46.6
P10809_1018
46.6
P10809_1037
54.4
P10809_1056
158.6
P10809_1075
64.3
P10809_1094
124.6
P10809_1106
98.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.0
Samples: 4
Max nTPM: 78.5
Min nTPM: 36.1
RHH5202_R3573
50.5
RHH5230_R3602
36.1
RHH5259_R3631
46.7
RHH5288_R3660
78.5
Effector memory CD8 T-cell nTPM: 111.3
Samples: 4
Max nTPM: 139.0
Min nTPM: 71.1
RHH5203_R3574
120.4
RHH5231_R3603
114.8
RHH5260_R3632
71.1
RHH5289_R3661
139.0
MAIT T-cell nTPM: 116.9
Samples: 4
Max nTPM: 162.7
Min nTPM: 77.2
RHH5233_R3605
162.7
RHH5205_R3576
77.2
RHH5262_R3634
105.1
RHH5297_R3663
122.4
Memory CD4 T-cell TFH nTPM: 42.7
Samples: 4
Max nTPM: 63.4
Min nTPM: 29.6
RHH5300_R3666
63.4
RHH5236_R3608
38.3
RHH5265_R3637
29.6
RHH5208_R3579
39.6
Memory CD4 T-cell Th1 nTPM: 60.1
Samples: 4
Max nTPM: 96.3
Min nTPM: 33.6
RHH5210_R3581
64.8
RHH5302_R3668
96.3
RHH5238_R3610
45.5
RHH5267_R3639
33.6
Memory CD4 T-cell Th1/Th17 nTPM: 57.8
Samples: 4
Max nTPM: 89.5
Min nTPM: 34.4
RHH5303_R3669
89.5
RHH5211_R3582
64.5
RHH5239_R3611
34.4
RHH5268_R3640
42.9
Memory CD4 T-cell Th17 nTPM: 49.4
Samples: 4
Max nTPM: 61.3
Min nTPM: 42.1
RHH5304_R3670
48.0
RHH5212_R3583
61.3
RHH5240_R3612
42.1
RHH5269_R3641
46.0
Memory CD4 T-cell Th2 nTPM: 49.9
Samples: 4
Max nTPM: 62.8
Min nTPM: 38.9
RHH5305_R3671
53.5
RHH5213_R3584
38.9
RHH5241_R3613
62.8
RHH5270_R3642
44.5
Naive CD4 T-cell nTPM: 63.8
Samples: 4
Max nTPM: 91.0
Min nTPM: 39.8
RHH5306_R3672
82.9
RHH5214_R3585
91.0
RHH5242_R3614
41.4
RHH5271_R3643
39.8
Naive CD8 T-cell nTPM: 47.7
Samples: 4
Max nTPM: 62.5
Min nTPM: 17.9
RHH5201_R3572
56.5
RHH5229_R3601
17.9
RHH5258_R3630
62.5
RHH5287_R3659
53.7
Non-Vd2 gdTCR nTPM: 170.2
Samples: 4
Max nTPM: 273.4
Min nTPM: 95.9
RHH5235_R3607
95.9
RHH5264_R3636
173.2
RHH5207_R3578
138.4
RHH5299_R3665
273.4
T-reg nTPM: 58.8
Samples: 4
Max nTPM: 83.2
Min nTPM: 41.2
RHH5301_R3667
83.2
RHH5237_R3609
55.8
RHH5266_R3638
41.2
RHH5209_R3580
55.0
Terminal effector memory CD4 T-cell nTPM: 125.9
Samples: 2
Max nTPM: 141.5
Min nTPM: 110.3
RHH5243_R3615
110.3
RHH5272_R3644
141.5
Terminal effector memory CD8 T-cell nTPM: 203.0
Samples: 4
Max nTPM: 272.9
Min nTPM: 123.1
RHH5232_R3604
181.4
RHH5204_R3575
234.6
RHH5261_R3633
123.1
RHH5296_R3662
272.9
Vd2 gdTCR nTPM: 161.7
Samples: 4
Max nTPM: 234.0
Min nTPM: 81.4
RHH5234_R3606
150.8
RHH5206_R3577
234.0
RHH5263_R3635
81.4
RHH5298_R3664
180.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
