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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
141.2
nTPM
FANTOM5:
57.6
Scaled Tags Per Million
Pig:
14.3
nTPM
Allen mouse:
0.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
141.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 63.9
1984
Male, age 76, both hemispheres
93.5
2301
Female, age 85, both hemispheres
72.2
2188
Female, age 91, both hemispheres
52.4
2090
Male, age 80, both hemispheres
37.7
Dorsal cochlear nucleus nTPM: 38.0
2058
Male, age 76, both hemispheres
49.3
2187
Female, age 91, both hemispheres
42.7
2370
Male, age 61, both hemispheres
40.3
2378
Male, age 80, both hemispheres
36.5
2802
Male, age 74, right hemisphere
21.0
Dorsal tegmental nucleus nTPM: 37.6
1936
Male, age 76, left hemisphere
45.3
2358
Male, age 61, both hemispheres
43.4
2083
Male, age 80, both hemispheres
40.0
2326
Male, age 74, both hemispheres
21.9
Dorsolateral tegmental area nTPM: 29.8
2141
Male, age 76, both hemispheres
59.1
2654
Male, age 80, both hemispheres
30.6
2751
Female, age 85, both hemispheres
22.5
2360
Male, age 74, both hemispheres
19.3
2337
Male, age 61, both hemispheres
17.7
Kolliker-Fuse nucleus nTPM: 61.0
2793
Female, age 91, left hemisphere
111.0
2163
Male, age 80, both hemispheres
36.2
2315
Male, age 76, right hemisphere
35.8
Lateral lemniscal nuclei nTPM: 125.5
2320
Female, age 91, left hemisphere
159.7
2453
Male, age 74, right hemisphere
148.1
2169
Male, age 76, both hemispheres
121.9
2036
Male, age 80, both hemispheres
107.6
2746
Female, age 85, left hemisphere
90.3
Lateral parabrachial nucleus nTPM: 58.4
2139
Female, age 85, right hemisphere
96.2
2013
Male, age 80, both hemispheres
62.3
2790
Male, age 61, both hemispheres
54.2
2792
Male, age 76, both hemispheres
21.0
Lateral vestibular nucleus nTPM: 35.2
2184
Male, age 76, both hemispheres
43.1
2311
Male, age 80, both hemispheres
27.4
Locus coeruleus nTPM: 41.3
2162
Male, age 80, both hemispheres
50.4
2720
Male, age 74, both hemispheres
47.6
1980
Male, age 76, both hemispheres
44.2
2317
Female, age 72, unknown
43.4
2123
Female, age 91, both hemispheres
38.3
2788
Male, age 74, unknown
33.1
2014
Male, age 55, unknown
32.0
Medial parabrachial nucleus nTPM: 47.0
2854
Male, age 80, both hemispheres
59.0
2463
Female, age 85, right hemisphere
58.7
2156
Male, age 61, both hemispheres
54.5
2786
Male, age 76, both hemispheres
41.8
2170
Female, age 91, both hemispheres
20.8
Medial periolivary nuclei nTPM: 112.7
2458
Female, age 91, both hemispheres
137.3
2171
Female, age 85, both hemispheres
134.5
2791
Male, age 74, right hemisphere
108.0
2063
Male, age 76, both hemispheres
103.7
2081
Male, age 80, both hemispheres
79.9
Motor facial nucleus nTPM: 123.4
2327
Male, age 80, both hemispheres
220.0
2795
Female, age 91, both hemispheres
133.0
2365
Male, age 74, right hemisphere
123.5
2062
Male, age 76, both hemispheres
112.3
2697
Female, age 85, both hemispheres
107.2
2126
Male, age 61, both hemispheres
44.1
Motor trigeminal nucleus nTPM: 89.8
2079
Male, age 80, both hemispheres
137.7
2560
Male, age 74, both hemispheres
119.1
2321
Female, age 91, both hemispheres
101.1
2335
Male, age 61, both hemispheres
49.6
2309
Male, age 76, both hemispheres
41.6
Nuclei of the trapezoid body nTPM: 132.6
2368
Female, age 91, both hemispheres
161.8
2735
Female, age 85, both hemispheres
150.4
2159
Male, age 61, both hemispheres
127.4
2166
Male, age 80, both hemispheres
123.2
1983
Male, age 76, both hemispheres
100.2
Nucleus raphe magnus nTPM: 141.2
2172
Female, age 85, both hemispheres
180.6
2328
Male, age 80, both hemispheres
161.4
2455
Male, age 74, both hemispheres
153.5
2160
Male, age 61, both hemispheres
134.5
2459
Female, age 91, both hemispheres
130.3
2051
Male, age 76, both hemispheres
86.9
Paramedian reticular nucleus nTPM: 35.4
2050
Female, age 85, both hemispheres
58.4
2313
Male, age 61, both hemispheres
41.5
2057
Male, age 80, both hemispheres
25.3
2052
Male, age 76, both hemispheres
16.3
Pedunculopontine tegmental nucleus nTPM: 41.7
1921
Female, age 85, both hemispheres
56.0
2338
Male, age 61, both hemispheres
38.7
2334
Male, age 80, both hemispheres
30.3
Pontine nuclei nTPM: 88.0
2787
Female, age 85, both hemispheres
134.0
2115
Male, age 80, left hemisphere
115.6
1968
Male, age 76, left hemisphere
92.1
2727
Male, age 61, right hemisphere
84.3
2319
Female, age 91, both hemispheres
79.1
2454
Male, age 74, left hemisphere
69.0
2109
Female, age 72, unknown
67.7
1863
Male, age 55, unknown
62.2
Pontine raphe nucleus nTPM: 61.9
2122
Female, age 85, midline
77.3
2853
Male, age 76, midline
46.6
Posteroventral cochlear nucleus nTPM: 30.0
2752
Female, age 85, both hemispheres
48.2
2371
Male, age 61, both hemispheres
40.9
2070
Male, age 76, both hemispheres
37.9
2341
Male, age 80, both hemispheres
20.4
2135
Female, age 91, both hemispheres
2.6
Principal sensory trigeminal nucleus nTPM: 109.0
2158
Male, age 61, both hemispheres
138.0
2008
Male, age 80, left hemisphere
136.4
2367
Female, age 91, left hemisphere
120.3
2324
Male, age 76, both hemispheres
41.1
Reticular pontine nucleus, caudal nTPM: 108.9
2332
Male, age 80, right hemisphere
200.3
2457
Female, age 91, both hemispheres
116.2
2092
Male, age 76, both hemispheres
86.0
2559
Male, age 74, both hemispheres
33.1
Reticular pontine nucleus, oral nTPM: 70.1
2366
Female, age 91, both hemispheres
111.3
2361
Male, age 74, both hemispheres
106.3
2012
Female, age 85, both hemispheres
72.1
2167
Male, age 76, both hemispheres
37.4
1939
Male, age 80, both hemispheres
23.4
Reticulotegmental nucleus nTPM: 69.7
2325
Male, age 76, both hemispheres
86.1
2333
Male, age 80, both hemispheres
79.4
2322
Female, age 91, both hemispheres
58.9
2452
Male, age 74, both hemispheres
54.3
Spinal trigeminal nucleus, oral nTPM: 54.2
2737
Female, age 85, both hemispheres
67.6
1978
Male, age 76, both hemispheres
48.6
2164
Male, age 80, both hemispheres
46.5
Subcoeruleus area nTPM: 61.1
2089
Male, age 76, left hemisphere
123.1
1958
Male, age 80, both hemispheres
76.2
2323
Female, age 91, left hemisphere
51.9
2451
Male, age 74, both hemispheres
36.9
2369
Female, age 85, left hemisphere
17.3
Superior olive nTPM: 118.7
2561
Female, age 91, both hemispheres
164.7
2329
Male, age 80, right hemisphere
152.5
1875
Female, age 85, both hemispheres
101.8
2364
Male, age 74, right hemisphere
101.8
2020
Male, age 76, both hemispheres
72.8
Ventral periolivary nuclei nTPM: 138.1
2794
Female, age 91, left hemisphere
183.7
2130
Female, age 85, both hemispheres
153.3
2165
Male, age 80, both hemispheres
145.4
2023
Male, age 76, both hemispheres
70.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 96.2
2449
Male, age 74, both hemispheres
153.3
2161
Male, age 80, both hemispheres
127.0
2456
Female, age 91, both hemispheres
117.6
1959
Male, age 76, both hemispheres
96.1
2840
Female, age 85, both hemispheres
48.1
2359
Male, age 61, both hemispheres
35.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
14.3
Pig sample
Sample description
nTPM
Pons nTPM: 14.4
Samples: 4
Max nTPM: 15.4
Min nTPM: 13.8
Sample A
Female
15.4
Sample B
Female
14.3
Sample C
Male
13.9
Sample D
Male
13.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
