HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:50.3 nTPM
GTEx:5.0 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:11.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 41.8
2148 Female, age 91, left hemisphere 56.3
2621 Female, age 67, right hemisphere 52.9
1855 Male, age 76, left hemisphere 37.7
1911 Female, age 85, right hemisphere 37.4
2529 Female, age 94, left hemisphere 34.2
1898 Male, age 80, left hemisphere 32.0
Dentate gyrus
nTPM: 49.5
2531 Female, age 67, both hemispheres 78.1
1927 Female, age 91, both hemispheres 51.2
2530 Female, age 94, left hemisphere 47.1
2246 Female, age 85, both hemispheres 43.9
2528 Male, age 74, both hemispheres 41.8
2010 Male, age 76, both hemispheres 34.7
Entorhinal gyrus
nTPM: 50.3
2686 Male, age 75, right hemisphere 69.3
2613 Female, age 94, left hemisphere 67.8
1787 Male, age 76, left hemisphere 46.7
2764 Male, age 80, right hemisphere 45.0
1938 Female, age 85, left hemisphere 39.0
2117 Female, age 91, right hemisphere 33.9
Hippocampus, CA1
nTPM: 41.9
2527 Male, age 74, both hemispheres 46.3
2045 Male, age 76, both hemispheres 43.3
2749 Male, age 80, left hemisphere 40.6
1873 Female, age 85, both hemispheres 39.7
2082 Female, age 91, right hemisphere 39.6
Hippocampus, CA2
nTPM: 37.9
2437 Female, age 94, left hemisphere 49.8
1892 Male, age 76, both hemispheres 39.7
2113 Female, age 91, right hemisphere 37.7
2249 Male, age 74, both hemispheres 36.8
1940 Female, age 85, left hemisphere 33.5
1963 Male, age 80, left hemisphere 29.8
Hippocampus, CA3
nTPM: 49.8
2861 Female, age 67, both hemispheres 83.5
2620 Female, age 94, left hemisphere 82.7
2137 Male, age 80, left hemisphere 37.0
1867 Male, age 76, both hemispheres 35.2
2436 Male, age 74, both hemispheres 31.1
1891 Female, age 85, both hemispheres 29.1
Parahippocampal cortex
nTPM: 50.3
2622 Female, age 67, right hemisphere 81.0
2693 Female, age 94, both hemispheres 64.4
2245 Female, age 91, both hemispheres 54.3
2250 Female, age 67, right hemisphere 48.5
2532 Female, age 72, left hemisphere 46.1
1990 Female, age 91, right hemisphere 44.9
2692 Male, age 74, both hemispheres 44.9
1933 Female, age 85, both hemispheres 43.2
2018 Male, age 76, both hemispheres 39.6
1850 Male, age 80, both hemispheres 35.9
Perirhinal gyrus
nTPM: 48.3
2848 Male, age 76, right hemisphere 57.4
2521 Female, age 94, right hemisphere 51.2
1841 Female, age 85, right hemisphere 44.6
1794 Male, age 80, right hemisphere 44.3
1847 Female, age 91, left hemisphere 43.9
Subiculum
nTPM: 36.0
2619 Male, age 74, both hemispheres 46.5
2729 Female, age 91, right hemisphere 43.1
1977 Female, age 85, both hemispheres 38.6
2438 Female, age 94, left hemisphere 36.0
1901 Male, age 80, both hemispheres 26.6
2042 Male, age 76, both hemispheres 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 197

Max nTPM: 23.7
Min nTPM: 0.1
Std nTPM: 3.6
Median nTPM: 4.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 15.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 14.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 13.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 13.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 12.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 12.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 11.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10153-102I9 76 years, female 34.4
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 22.0
Min nTPM: 12.0
Sample A Female 22.0
Sample B Female 14.8
Sample C Male 14.6
Sample D Male 12.0
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.9
Sample A Female 13.8
Sample B Female 12.7
Sample C Male 9.9
Sample D Male 11.1
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 17.6
Sample A Female 17.6
Sample B Female 18.2
Sample C Male 18.8
Sample D Male 18.0
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.2
Sample A Female 14.5
Sample B Female 12.9
Sample C Male 16.8
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.0
Sample A Male 11.1
Sample B Male 12.3
Sample C Female 10.5
Sample D Female 10.0
Hippocampal formation
nTPM: 9.6
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 11.6
Sample C Female 8.8
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
74359503 Antisense, RP_051219_04_G06, Mouse strain C57BL/6J (56 days, male) 0.2

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