BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.2 nTPM
HPA Brain:0.2 nTPM
GTEx:0.2 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.2
2481 Female, age 94, left hemisphere 0.6
1857 Female, age 85, left hemisphere 0.2
2288 Male, age 75, left hemisphere 0.2
2290 Female, age 72, unknown 0.2
1781 Male, age 74, unknown 0.1
1854 Male, age 80, left hemisphere 0.1
2289 Male, age 61, right hemisphere 0.1
2846 Female, age 79, unknown 0.1
Globus pallidus, externus
nTPM: 0.1
2567 Female, age 72, unknown 0.3
1996 Male, age 80, right hemisphere 0.1
2395 Male, age 75, both hemispheres 0.1
2646 Male, age 61, right hemisphere 0.1
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.1
2566 Female, age 72, unknown 0.4
1818 Male, age 74, unknown 0.2
2111 Female, age 85, right hemisphere 0.1
2287 Male, age 75, right hemisphere 0.1
2483 Female, age 94, right hemisphere 0.1
2778 Female, age 91, both hemispheres 0.1
2037 Male, age 80, right hemisphere 0.0
Nucleus accumbens
nTPM: 0.2
2391 Female, age 94, left hemisphere 0.3
2824 Male, age 61, right hemisphere 0.3
1806 Female, age 85, left hemisphere 0.2
2286 Male, age 75, left hemisphere 0.2
1783 Male, age 74, unknown 0.1
1856 Female, age 91, right hemisphere 0.1
2698 Female, age 72, unknown 0.1
2732 Male, age 80, right hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.2
2393 Male, age 80, right hemisphere 0.3
2821 Male, age 75, both hemispheres 0.3
2484 Female, age 94, left hemisphere 0.0
2569 Male, age 61, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 0.1
1979 Male, age 74, unknown 0.3
2029 Male, age 61, right hemisphere 0.3
2195 Female, age 85, both hemispheres 0.1
1812 Female, age 91, both hemispheres 0.0
2775 Male, age 80, right hemisphere 0.0
Putamen
nTPM: 0.1
1838 Male, age 80, right hemisphere 0.2
2466 Female, age 79, unknown 0.2
2489 Female, age 72, unknown 0.2
2647 Male, age 75, left hemisphere 0.2
1829 Male, age 74, unknown 0.1
1937 Female, age 91, right hemisphere 0.0
2482 Female, age 94, left hemisphere 0.0
Septal nuclei
nTPM: 0.2
2394 Male, age 61, left hemisphere 0.3
2629 Female, age 94, right hemisphere 0.3
2059 Female, age 85, both hemispheres 0.2
1960 Male, age 74, unknown 0.1
2199 Male, age 80, right hemisphere 0.1
2009 Female, age 91, both hemispheres 0.0
2031 Female, age 72, unknown 0.0
Stria terminalis, bed nucleus
nTPM: 0.2
2201 Male, age 74, unknown 0.3
1974 Female, age 91, both hemispheres 0.2
2486 Female, age 94, both hemispheres 0.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.2
Samples: 246

Max nTPM: 1.0
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 0.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 0.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 0.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 0.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 0.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 0.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 0.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 0.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 0.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 0.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.2
Samples: 246

Max nTPM: 1.2
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 0.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 0.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 0.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 0.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 0.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 0.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 0.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 0.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 0.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 0.2
Samples: 205

Max nTPM: 1.1
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 0.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 0.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 0.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 0.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 0.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 0.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 0.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 0.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 0.6
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