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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.6
nTPM
Monaco:
104.2
nTPM
Schmiedel:
66.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.6
HPA sample
nTPM
gdT-cell nTPM: 54.1
Samples: 6
Max nTPM: 64.6
Min nTPM: 37.5
P10809_1007
53.5
P10809_1022
53.9
P10809_1041
61.7
P10809_1060
64.6
P10809_1077
37.5
P10809_1098
53.3
MAIT T-cell nTPM: 63.6
Samples: 6
Max nTPM: 73.3
Min nTPM: 44.4
P10809_1006
72.7
P10809_1024
67.3
P10809_1043
72.0
P10809_1062
52.1
P10809_1083
44.4
P10809_1097
73.3
Memory CD4 T-cell nTPM: 56.3
Samples: 6
Max nTPM: 67.8
Min nTPM: 50.1
P10809_1014
53.6
P10809_1026
67.8
P10809_1045
55.5
P10809_1064
51.9
P10809_1086
50.1
P10809_1113
59.1
Memory CD8 T-cell nTPM: 59.9
Samples: 5
Max nTPM: 65.2
Min nTPM: 51.2
P10809_1012
63.5
P10809_1027
60.8
P10809_1046
58.8
P10809_1065
51.2
P10809_1111
65.2
Naive CD4 T-cell nTPM: 96.6
Samples: 6
Max nTPM: 120.0
Min nTPM: 82.5
P10809_1015
83.1
P10809_1030
119.3
P10809_1049
120.0
P10809_1068
88.2
P10809_1085
82.5
P10809_1112
86.5
Naive CD8 T-cell nTPM: 72.3
Samples: 6
Max nTPM: 94.8
Min nTPM: 42.8
P10809_1016
94.8
P10809_1031
89.6
P10809_1050
78.1
P10809_1069
61.5
P10809_1087
42.8
P10809_1110
66.9
T-reg nTPM: 66.7
Samples: 6
Max nTPM: 80.5
Min nTPM: 47.8
P10809_1018
52.6
P10809_1037
47.8
P10809_1056
80.5
P10809_1075
74.3
P10809_1094
79.5
P10809_1106
65.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.0
Samples: 4
Max nTPM: 103.0
Min nTPM: 36.4
RHH5202_R3573
55.5
RHH5230_R3602
37.0
RHH5259_R3631
36.4
RHH5288_R3660
103.0
Effector memory CD8 T-cell nTPM: 52.9
Samples: 4
Max nTPM: 77.0
Min nTPM: 36.2
RHH5203_R3574
54.4
RHH5231_R3603
77.0
RHH5260_R3632
36.2
RHH5289_R3661
43.9
MAIT T-cell nTPM: 104.3
Samples: 4
Max nTPM: 150.1
Min nTPM: 54.9
RHH5233_R3605
119.9
RHH5205_R3576
54.9
RHH5262_R3634
92.1
RHH5297_R3663
150.1
Memory CD4 T-cell TFH nTPM: 60.0
Samples: 4
Max nTPM: 77.8
Min nTPM: 42.5
RHH5300_R3666
64.9
RHH5236_R3608
77.8
RHH5265_R3637
42.5
RHH5208_R3579
54.6
Memory CD4 T-cell Th1 nTPM: 64.7
Samples: 4
Max nTPM: 95.7
Min nTPM: 44.1
RHH5210_R3581
70.9
RHH5302_R3668
95.7
RHH5238_R3610
48.1
RHH5267_R3639
44.1
Memory CD4 T-cell Th1/Th17 nTPM: 53.9
Samples: 4
Max nTPM: 83.8
Min nTPM: 30.6
RHH5303_R3669
83.8
RHH5211_R3582
60.5
RHH5239_R3611
30.6
RHH5268_R3640
40.7
Memory CD4 T-cell Th17 nTPM: 46.7
Samples: 4
Max nTPM: 59.3
Min nTPM: 27.2
RHH5304_R3670
59.3
RHH5212_R3583
59.1
RHH5240_R3612
27.2
RHH5269_R3641
41.1
Memory CD4 T-cell Th2 nTPM: 50.3
Samples: 4
Max nTPM: 54.3
Min nTPM: 43.7
RHH5305_R3671
51.8
RHH5213_R3584
51.4
RHH5241_R3613
54.3
RHH5270_R3642
43.7
Naive CD4 T-cell nTPM: 74.7
Samples: 4
Max nTPM: 98.1
Min nTPM: 52.1
RHH5306_R3672
94.6
RHH5214_R3585
98.1
RHH5242_R3614
54.1
RHH5271_R3643
52.1
Naive CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 109.3
Min nTPM: 47.9
RHH5201_R3572
81.3
RHH5229_R3601
47.9
RHH5258_R3630
109.3
RHH5287_R3659
68.7
Non-Vd2 gdTCR nTPM: 75.0
Samples: 4
Max nTPM: 110.9
Min nTPM: 56.5
RHH5235_R3607
56.5
RHH5264_R3636
73.6
RHH5207_R3578
59.0
RHH5299_R3665
110.9
T-reg nTPM: 66.1
Samples: 4
Max nTPM: 110.6
Min nTPM: 39.5
RHH5301_R3667
110.6
RHH5237_R3609
60.2
RHH5266_R3638
39.5
RHH5209_R3580
54.1
Terminal effector memory CD4 T-cell nTPM: 72.2
Samples: 2
Max nTPM: 85.4
Min nTPM: 58.9
RHH5243_R3615
58.9
RHH5272_R3644
85.4
Terminal effector memory CD8 T-cell nTPM: 79.0
Samples: 4
Max nTPM: 117.6
Min nTPM: 35.8
RHH5232_R3604
73.8
RHH5204_R3575
117.6
RHH5261_R3633
35.8
RHH5296_R3662
88.6
Vd2 gdTCR nTPM: 92.9
Samples: 4
Max nTPM: 140.6
Min nTPM: 58.7
RHH5234_R3606
65.0
RHH5206_R3577
107.4
RHH5263_R3635
58.7
RHH5298_R3664
140.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
