HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:34.5 nTPM
HPA Brain:54.9 nTPM
GTEx:34.5 nTPM
FANTOM5:49.0 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:17.9 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008423
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.9
Sample id Sample description nTPM
Hippocampus
nTPM: 49.6
2148 Female, age 91, left hemisphere 54.1
1855 Male, age 76, left hemisphere 53.6
2529 Female, age 94, left hemisphere 52.3
2621 Female, age 67, right hemisphere 49.4
1911 Female, age 85, right hemisphere 46.4
1898 Male, age 80, left hemisphere 41.7
Dentate gyrus
nTPM: 45.0
2246 Female, age 85, both hemispheres 49.9
2530 Female, age 94, left hemisphere 47.2
2531 Female, age 67, both hemispheres 46.2
2010 Male, age 76, both hemispheres 44.9
2528 Male, age 74, both hemispheres 41.9
1927 Female, age 91, both hemispheres 39.8
Entorhinal gyrus
nTPM: 54.9
2686 Male, age 75, right hemisphere 61.3
2117 Female, age 91, right hemisphere 60.7
1787 Male, age 76, left hemisphere 54.0
2613 Female, age 94, left hemisphere 53.1
1938 Female, age 85, left hemisphere 50.8
2764 Male, age 80, right hemisphere 49.7
Hippocampus, CA1
nTPM: 42.2
2045 Male, age 76, both hemispheres 48.0
2082 Female, age 91, right hemisphere 45.0
2527 Male, age 74, both hemispheres 43.8
1873 Female, age 85, both hemispheres 43.4
2749 Male, age 80, left hemisphere 30.7
Hippocampus, CA2
nTPM: 42.9
2437 Female, age 94, left hemisphere 47.5
2113 Female, age 91, right hemisphere 46.0
1892 Male, age 76, both hemispheres 45.4
1940 Female, age 85, left hemisphere 43.7
1963 Male, age 80, left hemisphere 41.0
2249 Male, age 74, both hemispheres 33.8
Hippocampus, CA3
nTPM: 45.4
2861 Female, age 67, both hemispheres 67.5
2620 Female, age 94, left hemisphere 46.5
1867 Male, age 76, both hemispheres 45.6
2436 Male, age 74, both hemispheres 39.1
1891 Female, age 85, both hemispheres 37.7
2137 Male, age 80, left hemisphere 35.6
Parahippocampal cortex
nTPM: 49.1
2622 Female, age 67, right hemisphere 66.0
2692 Male, age 74, both hemispheres 54.9
2693 Female, age 94, both hemispheres 51.8
2245 Female, age 91, both hemispheres 50.2
1933 Female, age 85, both hemispheres 48.6
2018 Male, age 76, both hemispheres 46.1
1850 Male, age 80, both hemispheres 45.3
2250 Female, age 67, right hemisphere 44.9
2532 Female, age 72, left hemisphere 42.7
1990 Female, age 91, right hemisphere 41.0
Perirhinal gyrus
nTPM: 51.2
1794 Male, age 80, right hemisphere 55.6
2521 Female, age 94, right hemisphere 54.4
1847 Female, age 91, left hemisphere 53.7
2848 Male, age 76, right hemisphere 47.7
1841 Female, age 85, right hemisphere 44.7
Subiculum
nTPM: 46.7
2438 Female, age 94, left hemisphere 53.8
2619 Male, age 74, both hemispheres 52.6
2729 Female, age 91, right hemisphere 49.3
1977 Female, age 85, both hemispheres 43.8
2042 Male, age 76, both hemispheres 41.7
1901 Male, age 80, both hemispheres 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.5
Samples: 197

Max nTPM: 79.0
Min nTPM: 8.1
Std nTPM: 12.0
Median nTPM: 33.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 79.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 76.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 72.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 71.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 67.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 63.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 63.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 60.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 57.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 57.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.0
FF:10153-102I9 76 years, female 59.5
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.3
Sample A Female 27.9
Sample B Female 23.0
Sample C Male 27.1
Sample D Male 21.3
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 25.4
Min nTPM: 16.4
Sample A Female 23.3
Sample B Female 24.2
Sample C Male 25.4
Sample D Male 16.4
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 27.8
Min nTPM: 18.6
Sample A Female 24.6
Sample B Female 18.6
Sample C Male 27.8
Sample D Male 19.3
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 19.5
Sample C Male 29.7
Sample D Male 27.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 20.9
Min nTPM: 16.4
Sample A Male 17.0
Sample B Male 17.4
Sample C Female 16.4
Sample D Female 20.9
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 16.6
Sample C Female 13.7
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
71656916 Antisense, RP_050927_04_E07, Mouse strain C57BL/6J (56 days, male) 3.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org