We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.8
nTPM
Monaco:
113.4
nTPM
Schmiedel:
47.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.8
HPA sample
nTPM
gdT-cell nTPM: 37.7
Samples: 6
Max nTPM: 49.7
Min nTPM: 27.2
P10809_1007
27.2
P10809_1022
33.0
P10809_1041
35.4
P10809_1060
36.3
P10809_1077
44.4
P10809_1098
49.7
MAIT T-cell nTPM: 63.8
Samples: 6
Max nTPM: 80.7
Min nTPM: 40.4
P10809_1006
53.4
P10809_1024
77.0
P10809_1043
40.4
P10809_1062
58.5
P10809_1083
72.9
P10809_1097
80.7
Memory CD4 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 67.2
Min nTPM: 28.7
P10809_1014
43.2
P10809_1026
28.7
P10809_1045
30.2
P10809_1064
60.5
P10809_1086
67.2
P10809_1113
53.5
Memory CD8 T-cell nTPM: 52.3
Samples: 5
Max nTPM: 75.8
Min nTPM: 33.2
P10809_1012
41.4
P10809_1027
46.4
P10809_1046
33.2
P10809_1065
64.9
P10809_1111
75.8
Naive CD4 T-cell nTPM: 40.0
Samples: 6
Max nTPM: 55.1
Min nTPM: 25.7
P10809_1015
41.7
P10809_1030
36.0
P10809_1049
25.7
P10809_1068
44.9
P10809_1085
55.1
P10809_1112
36.4
Naive CD8 T-cell nTPM: 41.7
Samples: 6
Max nTPM: 64.8
Min nTPM: 27.6
P10809_1016
27.6
P10809_1031
36.4
P10809_1050
31.2
P10809_1069
48.7
P10809_1087
64.8
P10809_1110
41.6
T-reg nTPM: 60.5
Samples: 6
Max nTPM: 75.4
Min nTPM: 33.2
P10809_1018
49.6
P10809_1037
68.4
P10809_1056
33.2
P10809_1075
69.3
P10809_1094
67.0
P10809_1106
75.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.5
Samples: 4
Max nTPM: 123.0
Min nTPM: 49.0
RHH5202_R3573
123.0
RHH5230_R3602
65.2
RHH5259_R3631
49.0
RHH5288_R3660
88.6
Effector memory CD8 T-cell nTPM: 112.5
Samples: 4
Max nTPM: 135.0
Min nTPM: 85.5
RHH5203_R3574
116.7
RHH5231_R3603
135.0
RHH5260_R3632
85.5
RHH5289_R3661
112.9
MAIT T-cell nTPM: 113.4
Samples: 4
Max nTPM: 139.4
Min nTPM: 66.2
RHH5233_R3605
139.4
RHH5205_R3576
66.2
RHH5262_R3634
125.4
RHH5297_R3663
122.6
Memory CD4 T-cell TFH nTPM: 91.8
Samples: 4
Max nTPM: 122.0
Min nTPM: 62.0
RHH5300_R3666
62.0
RHH5236_R3608
122.0
RHH5265_R3637
97.3
RHH5208_R3579
86.0
Memory CD4 T-cell Th1 nTPM: 74.1
Samples: 4
Max nTPM: 88.4
Min nTPM: 55.4
RHH5210_R3581
75.6
RHH5302_R3668
88.4
RHH5238_R3610
55.4
RHH5267_R3639
77.1
Memory CD4 T-cell Th1/Th17 nTPM: 81.2
Samples: 4
Max nTPM: 115.9
Min nTPM: 35.1
RHH5303_R3669
114.5
RHH5211_R3582
115.9
RHH5239_R3611
35.1
RHH5268_R3640
59.2
Memory CD4 T-cell Th17 nTPM: 72.6
Samples: 4
Max nTPM: 105.1
Min nTPM: 51.8
RHH5304_R3670
74.3
RHH5212_R3583
105.1
RHH5240_R3612
51.8
RHH5269_R3641
59.2
Memory CD4 T-cell Th2 nTPM: 105.2
Samples: 4
Max nTPM: 113.4
Min nTPM: 93.1
RHH5305_R3671
103.3
RHH5213_R3584
113.4
RHH5241_R3613
111.0
RHH5270_R3642
93.1
Naive CD4 T-cell nTPM: 64.8
Samples: 4
Max nTPM: 76.7
Min nTPM: 46.0
RHH5306_R3672
63.2
RHH5214_R3585
76.7
RHH5242_R3614
73.3
RHH5271_R3643
46.0
Naive CD8 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 77.4
Min nTPM: 44.8
RHH5201_R3572
77.4
RHH5229_R3601
44.8
RHH5258_R3630
74.9
RHH5287_R3659
77.2
Non-Vd2 gdTCR nTPM: 99.1
Samples: 4
Max nTPM: 134.8
Min nTPM: 65.0
RHH5235_R3607
65.0
RHH5264_R3636
134.8
RHH5207_R3578
101.2
RHH5299_R3665
95.5
T-reg nTPM: 82.6
Samples: 4
Max nTPM: 134.2
Min nTPM: 56.2
RHH5301_R3667
69.3
RHH5237_R3609
134.2
RHH5266_R3638
56.2
RHH5209_R3580
70.6
Terminal effector memory CD4 T-cell nTPM: 81.1
Samples: 2
Max nTPM: 95.0
Min nTPM: 67.2
RHH5243_R3615
67.2
RHH5272_R3644
95.0
Terminal effector memory CD8 T-cell nTPM: 91.9
Samples: 4
Max nTPM: 108.6
Min nTPM: 58.2
RHH5232_R3604
108.0
RHH5204_R3575
108.6
RHH5261_R3633
58.2
RHH5296_R3662
92.6
Vd2 gdTCR nTPM: 88.0
Samples: 4
Max nTPM: 110.7
Min nTPM: 70.7
RHH5234_R3606
85.6
RHH5206_R3577
110.7
RHH5263_R3635
85.1
RHH5298_R3664
70.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
