HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:47.0 nTPM
HPA Brain:92.9 nTPM
GTEx:47.0 nTPM
FANTOM5:169.6 Scaled Tags Per Million
Mouse:97.3 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044976
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.9
Sample id Sample description nTPM
Hippocampus
nTPM: 67.1
1898 Male, age 80, left hemisphere 89.6
2621 Female, age 67, right hemisphere 81.1
1855 Male, age 76, left hemisphere 66.8
1911 Female, age 85, right hemisphere 58.6
2529 Female, age 94, left hemisphere 56.9
2148 Female, age 91, left hemisphere 49.9
Dentate gyrus
nTPM: 70.3
2010 Male, age 76, both hemispheres 84.3
1927 Female, age 91, both hemispheres 79.7
2246 Female, age 85, both hemispheres 73.9
2528 Male, age 74, both hemispheres 67.1
2530 Female, age 94, left hemisphere 67.1
2531 Female, age 67, both hemispheres 49.5
Entorhinal gyrus
nTPM: 66.7
1938 Female, age 85, left hemisphere 83.2
2764 Male, age 80, right hemisphere 82.5
1787 Male, age 76, left hemisphere 74.1
2613 Female, age 94, left hemisphere 63.9
2117 Female, age 91, right hemisphere 54.6
2686 Male, age 75, right hemisphere 42.2
Hippocampus, CA1
nTPM: 76.7
2749 Male, age 80, left hemisphere 106.8
1873 Female, age 85, both hemispheres 78.3
2527 Male, age 74, both hemispheres 71.3
2045 Male, age 76, both hemispheres 69.9
2082 Female, age 91, right hemisphere 57.2
Hippocampus, CA2
nTPM: 71.5
1892 Male, age 76, both hemispheres 91.8
1963 Male, age 80, left hemisphere 83.5
2249 Male, age 74, both hemispheres 76.7
2437 Female, age 94, left hemisphere 62.8
1940 Female, age 85, left hemisphere 59.3
2113 Female, age 91, right hemisphere 55.3
Hippocampus, CA3
nTPM: 70.6
2436 Male, age 74, both hemispheres 84.9
1867 Male, age 76, both hemispheres 83.9
2137 Male, age 80, left hemisphere 81.9
1891 Female, age 85, both hemispheres 65.6
2620 Female, age 94, left hemisphere 62.1
2861 Female, age 67, both hemispheres 45.1
Parahippocampal cortex
nTPM: 74.9
1850 Male, age 80, both hemispheres 97.8
1933 Female, age 85, both hemispheres 90.1
1990 Female, age 91, right hemisphere 84.7
2250 Female, age 67, right hemisphere 77.4
2018 Male, age 76, both hemispheres 74.6
2245 Female, age 91, both hemispheres 73.3
2532 Female, age 72, left hemisphere 72.9
2693 Female, age 94, both hemispheres 70.1
2692 Male, age 74, both hemispheres 55.8
2622 Female, age 67, right hemisphere 52.3
Perirhinal gyrus
nTPM: 92.9
1847 Female, age 91, left hemisphere 116.0
1794 Male, age 80, right hemisphere 98.8
1841 Female, age 85, right hemisphere 90.1
2521 Female, age 94, right hemisphere 83.1
2848 Male, age 76, right hemisphere 76.7
Subiculum
nTPM: 65.6
1977 Female, age 85, both hemispheres 80.6
1901 Male, age 80, both hemispheres 72.3
2438 Female, age 94, left hemisphere 63.1
2619 Male, age 74, both hemispheres 61.7
2042 Male, age 76, both hemispheres 59.6
2729 Female, age 91, right hemisphere 56.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.0
Samples: 197

Max nTPM: 89.7
Min nTPM: 22.3
Std nTPM: 13.2
Median nTPM: 44.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 89.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 78.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 76.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 75.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 75.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 72.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 72.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 72.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 71.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.6
FF:10169-103B7 60 years, female 221.2
FF:10153-102I9 76 years, female 117.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.3
Samples: 4

Max nTPM: 91.7
Min nTPM: 83.4
Sample A Male 83.4
Sample B Male 86.9
Sample C Female 91.2
Sample D Female 91.7
Hippocampal formation
nTPM: 97.3
Samples: 4

Max nTPM: 101.2
Min nTPM: 88.1
Sample A Male 101.2
Sample B Male 98.7
Sample C Female 101.1
Sample D Female 88.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
71280982 Antisense, RP_050818_02_A02, Mouse strain C57BL/6J (56 days, male) 6.4

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